| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0698 |
|---|
| Symbol | |
|---|
| ID | 6286405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 735636 |
|---|
| End bp | 736445 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642624261 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001898281 |
|---|
| Protein GI | 187927794 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0390] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00245] conserved hypothetical protein TIGR00245 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.645754 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.217447 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGCC AGGACCTCTC CCTTTCCGCC TGGCAGGTCG GCATTGCGGC TGCGCTGATC
CTCGTGAACG GTGCGCTGTC CATCGGCCTG GGGCTTGGGC TCGAGCGACG CCTGGCGTGG
GCGGCCGTGC GCACCGTGGT GCAATTGCTG GCGGTGGGCT TCGTGCTCGA ATGGGTATTC
GCCCACGCGC AATGGGCGGT GGTGCTGGGC ATCGTGACCG TCATGACGCT CATTGCAGGG
CACGCGACTG GCAGTCGAGG CGCACGCGGC TATGCCGGAC TGCGGTTGGA CGGCACGTTG
TCGGTCTTCG GCAGCACATG GCTGATCGGA GCGATCGGGC TGGTGGTCGT ACTGCATGCG
CATCCGTGGT ATCAGCCGCA ATACGCCATC CCGATCATGG GGATGATTCT TGGCAACACG
CTCACCGGCG TAGGCCTGGC GCTCGAGCGC ATGACCGGCG AGCTGACTGC CACGCGCGAC
CAAGTGGAGA CGATTCTTGC GCTCGGCGGC ACGCACTGGG AAGCGGCGCG CAATGCAGCA
CGAACGGCCG TGCGCGCCGG CATGACACCG ATCATCAACC AGATGACCGT GGTGGGCGTG
GTGAGCCTGC CCGGCATGAT GACGGGCCAG GTACTGGCCG GGCAGTCTCC ACTGGAGGCC
GTGCGCTACC AGATCGTCAT CATGTTCCTG CTGGCGGCAG CTTCTGGGCT GGGGACGGTT
GCGGCCGTGC TGCTGGCCTA TCGCCGGCTG TTCAGCCGTG AGCACCAGTT GCTGACTGCA
CGCATCACAC AACGCGGCGG AACGAAATAG
|
|---|
| Protein sequence | MNGQDLSLSA WQVGIAAALI LVNGALSIGL GLGLERRLAW AAVRTVVQLL AVGFVLEWVF
AHAQWAVVLG IVTVMTLIAG HATGSRGARG YAGLRLDGTL SVFGSTWLIG AIGLVVVLHA
HPWYQPQYAI PIMGMILGNT LTGVGLALER MTGELTATRD QVETILALGG THWEAARNAA
RTAVRAGMTP IINQMTVVGV VSLPGMMTGQ VLAGQSPLEA VRYQIVIMFL LAAASGLGTV
AAVLLAYRRL FSREHQLLTA RITQRGGTK
|
|---|
| |