| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0678 |
|---|
| Symbol | glyA |
|---|
| ID | 6288856 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 716948 |
|---|
| End bp | 718195 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642624240 |
|---|
| Product | serine hydroxymethyltransferase |
|---|
| Protein accession | YP_001898261 |
|---|
| Protein GI | 187927774 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.478588 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGAAC GCAGCCGCTA TACGATCGAC CAGATCGATC CCGAAATCTT TGCCGCCATC
CAGAAGGAAA ATCAGCGTCA GGAAGACCAC ATCGAGCTGA TTGCCTCTGA GAACTACACC
TCCCCGGCCG TGATGGCCGC GCAGGGCTCG CAACTGACCA ACAAGTACGC CGAGGGCTAC
CCCGGCAAGC GTTACTACGG CGGTTGCGAA TACGTGGACG TGGTGGAACA GCTCGCCATC
GATCGCGTGA AGCAGCTCTT TGGGGCCGAA GCTGCCAACG TGCAGCCGAA CTCGGGCTCG
CAGGCCAACC AGGGCGTGTT CTTCGCCGTG CTCAAGCCGG GCGACACGAT CATGGGGATG
AGCCTGGCCG AAGGCGGCCA CCTGACCCAC GGCATGGCGC TCAACATGAG CGGCAAGTGG
TTCAACGTTG TCAGCTACGG CCTGAACGCT CAGGAAGACA TCGACTACGA CGCGCTCGAA
GCCCTGGCGC AAGAGAAGAA GCCGAAGCTG ATCATTGCCG GCGCATCGGC ATTTGCGCTG
CGCATCGATT TCGAACGCAT CGGCAAGATC GCCAAGTCGA TTGGTGCGTA CTTCATGGTG
GACATGGCCC ACTACGCGGG CCTGATCGCT GCCGGTGTGT ACCCGAACCC GGTGCCGCAC
GCCGACTTCG TCACGACGAC CACGCACAAG AGCCTGCGCG GCCCGCGCGG CGGCGTGATC
CTGATGAAGG CCGAACACGA GAAGGCCATC AACTCGGCGA TCTTCCCGGG CATCCAGGGC
GGCCCGCTGA TGCACGTGAT TGCCGGCAAG GCGGTGGCGT TCAAGGAAGC ACTGTCGCCC
GAGTTCAAGG CTTACCAGGA ACAGGTGGTG AAGAACGCTG CAGCCATGGC CGAAACGCTG
ATGGCCCGCG GCCTGCGTAT CGTCTCCGGC CGCACCGAAA GCCACGTGAT GCTGGTCGAC
CTGCGCGCCA AGAAGATCAC CGGCAAGGAA GCCGAAAAGG TGCTGGGTGA TGCACACATC
ACGGTCAACA AGAACGCCAT TCCGAATGAC CCGGAAAAGC CGTTCGTGAC CTCGGGCGTG
CGCCTGGGCT CGCCTGCCAT GACCACGCGT GGCTTCAAGG AAGCCGAGGC CGTGAAGGTC
GCCCACCTGA TTGCCGATGT GCTGGACAAC CCGCACGACG AGGCCAACAT CGCCGCCGTG
CGCGCCAAGG TGGCTGAGCT GACCAAGCAG TTCCCGGTCT ACGGCTGA
|
|---|
| Protein sequence | MFERSRYTID QIDPEIFAAI QKENQRQEDH IELIASENYT SPAVMAAQGS QLTNKYAEGY
PGKRYYGGCE YVDVVEQLAI DRVKQLFGAE AANVQPNSGS QANQGVFFAV LKPGDTIMGM
SLAEGGHLTH GMALNMSGKW FNVVSYGLNA QEDIDYDALE ALAQEKKPKL IIAGASAFAL
RIDFERIGKI AKSIGAYFMV DMAHYAGLIA AGVYPNPVPH ADFVTTTTHK SLRGPRGGVI
LMKAEHEKAI NSAIFPGIQG GPLMHVIAGK AVAFKEALSP EFKAYQEQVV KNAAAMAETL
MARGLRIVSG RTESHVMLVD LRAKKITGKE AEKVLGDAHI TVNKNAIPND PEKPFVTSGV
RLGSPAMTTR GFKEAEAVKV AHLIADVLDN PHDEANIAAV RAKVAELTKQ FPVYG
|
|---|
| |