Gene Rpic_0661 details

Gene Information

• Locus tag: Rpic_0661
• Symbol: ribH
• ID: 6288301
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia pickettii 12J
• Kingdom: Bacteria
• Replicon accession: NC_010682
• Strand: -
• Start bp: 702407
• End bp: 702907
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 642624223
• Product: 6,7-dimethyl-8-ribityllumazine synthase
• Protein accession: YP_001898244
• Protein GI: 187927757
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0054] Riboflavin synthase beta-chain
• TIGRFAM ID: [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 24
• Fosmid unclonability p-value: 0.0953896
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGACCACG GCTTCTACCC GACCAATCTC AACGGCGAAG GCCTGCGCAT CGGCATCGTC 
CAGGCGCGTT TCAACGAGCC CGTGTGCGAA GCACTGCGAG AAGCTTGCGT CGCTGAACTC 
GAACAACTCG GCGTGGCCGG CGAAGACGTG CTGCTCGTGA CTGTGCCGGG TGCGCTGGAA 
GTCCCGCTGG CGCTGCAGAA GATGGCCGAG TCGGGCCAGT TCGACGCGCT GATCGCGCTG 
GGCGCAGTCA TCCGCGGCGA GACGTACCAC TTCGAACTGG TGTCCAACGA ATCGGGCGCC 
GGCATCACGC GCGTGGGCCT GGACTTCAAC ATCGCCATCG CCAACGGCAT CCTGACCACC 
GACACAGACG CACAGGCCCA CGCCCGCACC CGCGAAAAAG GTCGCGACTG CGCCCGCACC 
GCCGTCGAAA TGGCCAACCT GACCAACGAC CTCGACGGTC TGCAGGATCA CGGCCAGGAC 
GACGACGGCG AGAATGAATA A 

 

Protein sequence

MDHGFYPTNL NGEGLRIGIV QARFNEPVCE ALREACVAEL EQLGVAGEDV LLVTVPGALE 
VPLALQKMAE SGQFDALIAL GAVIRGETYH FELVSNESGA GITRVGLDFN IAIANGILTT 
DTDAQAHART REKGRDCART AVEMANLTND LDGLQDHGQD DDGENE