Gene Rpic_0600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0600 
Symbol 
ID6289276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp634816 
End bp635829 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content61% 
IMG OID642624161 
Productglycosyl transferase family 2 
Protein accessionYP_001898183 
Protein GI187927696 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.755696 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGATT ACAAAAGAAA CCAACTCCTT TCGCTGGTTG TACCGTTCTA CAACGAAGGC 
GAGGCGCTGG AGTCCTTCTT TGCACGGGTC GTGCCGATCC TGGAGTCGGT CGAGTTCATG
CAGTTCGAGA TCGTGTGCGT GAACGACGGT AGCAAAGACG ACACCCTGCA GAAGTTGATC
GCGGTGTCCC GCATGGACGA GCGTGTACGG GTGATCGATC TGACACGCAA CTTCGGCAAG
GAAGCCGCGC TGACGGCCGG CATTGACGAG GCACTTGGCG ATGCCGTCAT CCCAATCGAT
GCTGATCTGC AAGACCCGCC GGAACTGATT CCCACCCTGG TGGCACACTG GCAGAAGGGG
GCGGAAGTGG TCCTTGCACA GCGCGCCAGC CGTGCCTGCG ACACCTTCCT CAAGCGGGTG
ACTGCGGCCG CGTATTACCG AGTCCACAAC ACGTTGTCCG ACCTGAAGCT GCCGGAAAAC
GTTGGCGATT TCCGCTTGAT GGACCGTGCG GTCGTCAATG CGCTCAAGCA GTTGCCCGAG
CGGCACCGAT TCATGAAGGG CCTGTTTGCG TGGGTGGGTT TCAACACCGT GATCGTTCCG
TACGAGCGGG AGGCACGCAG CGCGGGTCAG TCGAAGTTCT CCGGCTGGCG CCTGTGGAAT
TTCGCGCTGG AAGGCATCAC CAGTTTCAGC ACCTGGCCGC TGCGGAGCTG GACGTATATC
GGTTTGGCCA TTGCAAGCCT GGCATTCGTG TACGGCAGCT ACATCATCGC TCGCACCATG
GTTCTGGGTG TGGATGTGCC GGGCTACGCC TCGCTGCTGT CGCTGCTGCT GTTCTTTGGT
GGCCTGCAAT TGATCGGGTT GGGCGTGGTG GGCGAATACA TTGGCCGTAT CTACGACGAG
GCCAAGGGGC GCCCGATCTA CCTGGTGAAG CGCCGCTATC AGGAGCGCCG GCTGCGCAAC
CGGTTGACGG GTGAGCGGCG CGTGATTCAG ATGGTGCGAG GTCAGCGCGG TTAG
 
Protein sequence
MLDYKRNQLL SLVVPFYNEG EALESFFARV VPILESVEFM QFEIVCVNDG SKDDTLQKLI 
AVSRMDERVR VIDLTRNFGK EAALTAGIDE ALGDAVIPID ADLQDPPELI PTLVAHWQKG
AEVVLAQRAS RACDTFLKRV TAAAYYRVHN TLSDLKLPEN VGDFRLMDRA VVNALKQLPE
RHRFMKGLFA WVGFNTVIVP YEREARSAGQ SKFSGWRLWN FALEGITSFS TWPLRSWTYI
GLAIASLAFV YGSYIIARTM VLGVDVPGYA SLLSLLLFFG GLQLIGLGVV GEYIGRIYDE
AKGRPIYLVK RRYQERRLRN RLTGERRVIQ MVRGQRG