| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0587 |
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| Symbol | |
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| ID | 6287087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 621275 |
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| End bp | 622252 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642624148 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001898170 |
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| Protein GI | 187927683 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.292089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.415996 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAA TCTTCTACGC GTTCGCAATC CTGCTGTTCG CGGCCGTCGT ACTCTGCATC
GAGGGGGTCT ACCAGTGGTG GAACAACTAC CACGGCCCCG AGGCCAAGCG CGTTGATGCC
CGCATCCGCG CGCTGTCCGC GGGCGGACAC ATCGGCACTG AACAGCTCTC GATTCTGAAG
AAACGCCTGC TGAGCGAATC GCCCCAGTTC CAGCGCTGGT TGATGAGCCT CCCCCGCGTG
AGCACGATTG ACCGTTGGCT GGAGCAATCC GGCAGCGCTT GGTCGGTCGC GCAGCTCCTG
GGATACACCA TCCTGACTGG CGCCGGAGTG CTGGCAGTAG GTGCGTTGCT GCCGGTCCCG
TTTGGCATCG TGACGGCCTG CGCGTTGCTC ATGTCTGCGC TGCCGGTCTT GCACATCGCA
TCGCAGCGGC GCAAACGCCT GAAGAAGCTG GAGGCGCAGC TTCCCGACGC GGTGGACATG
ATTGCCCGTG CACTACGTGC CGGCCACTCC TTCGCCAGCG CGCTAGGCAT GGTCGGGCAA
GAGATTAAGG AGCCCATGGG TCCCGAGTTC CACACTACAT TCGAAGAAAT CAACTACGGC
GTATCGCTCG ATGAAGCCTT GACCAACCTG GCCAAGCGGG TGCCCGTCAA TGACCTGCGC
TACTTCGTGA TTGCCGTGCT AATCCAACGC GAAAGCGGCG GCAACCTGGC GGAGATTCTC
GACACAATCG GCAACCTTGT GCGCGAGCGC CTGAAGCTGT ACGACAAGAT CCGCGTGCTG
TCAGCCGAAG GGCGTTTGTC GGCGTGGATT CTCGGGCTGC TGCCCTTCTG CACCGCCGGC
ATGATTCTCC TTGTCAATCC CGACTTCATG AAGGTGCTAT GGACGGACCC GATGGGCCTG
AAGATGATCG GCCTGGCGCT GTTCAACATG GTGATGGGCC TGATCTGGAT GCGCAAGATC
ATCCGCATCC GGGTCTGA
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| Protein sequence | MNEIFYAFAI LLFAAVVLCI EGVYQWWNNY HGPEAKRVDA RIRALSAGGH IGTEQLSILK
KRLLSESPQF QRWLMSLPRV STIDRWLEQS GSAWSVAQLL GYTILTGAGV LAVGALLPVP
FGIVTACALL MSALPVLHIA SQRRKRLKKL EAQLPDAVDM IARALRAGHS FASALGMVGQ
EIKEPMGPEF HTTFEEINYG VSLDEALTNL AKRVPVNDLR YFVIAVLIQR ESGGNLAEIL
DTIGNLVRER LKLYDKIRVL SAEGRLSAWI LGLLPFCTAG MILLVNPDFM KVLWTDPMGL
KMIGLALFNM VMGLIWMRKI IRIRV
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