Gene Rpic_0576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0576 
Symbol 
ID6287628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp608749 
End bp610125 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content63% 
IMG OID642624137 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001898159 
Protein GI187927672 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.176736 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGAC CGCGCTCGCT CCAAGGTCGG CTGGTGTTGT TGGTGCTTGG CGCCGTCGCC 
GGCCTATGGC TCATCACCGC ATTGATCACG TGGTACGACG CCCAGGACGA GATCGATCAA
CTGCTGGACA GTCATCTAGC GCAAGCTGGT GCGCTACTGG TCATGCAGCA CGCACAGGCC
GTCGACGAGG ACGATGAGCC GAGTCACGAC CTGCCTGTCC AGCATCGTTA CGCGCCCAAA
GTCGCCTTTC AGGTCTTTCA CGAAGGGAAG CTGGGCATCC ACTCGGCCAA CGCGCCGAAC
CAGCCGATGG TTGCGCCAGG CGAGCGCACC GCGTCCGGAT TCTCTACGGT GCAAATCGGA
GGCAATGCTT GGCGTGTCTT TGTAGCGCAG GGAGTCTACA AGGACATCCA GGTCTACGTT
GGCGAGCGCA TCGACTCGCG CACCGCAATC CTGTCCGCCC TCTTGCGCAA CATGCTGTGG
CCGATGGCGT TGGCGTTGCC GTTACTCGCC TTGGCCGTCT GGTGGGCGGT CAAGCGCGGG
ATGCTGCCGC TGCGCAGATT GGGTAACGCG CTTGCCGAGC GTGACCCGCG AGCACTCGAT
CCGGTCCGGA TGCCCCATGC GCCGGTTGAG ATGACGCCCA TGCTCGACGC GCTCAACGCG
CTCTTTGCCC GCATTCAGAC CATGCTCGAC GCCGAGCGCC GCTTCACTGC CGACGCCGCC
CACGAATTGC GCACGCCGAT TGCCGCAATC AAGGCCCAGG CCCAGGTGGC AATGGCCGCC
GAAGAGGACG CCATGCGTCG CCACGCCTTG GTGGGAACGT TGGAAGGATG CGATCGCGCT
GCCCATCTGG TCGACCAATT GCTGTTGCTT TCGCGTCTGG AAGCGAACGC CGGCATTTCG
ATTGAACCGA TCGACCTTGG TGCGCTGGCT AGACAAGTGA TGGCAGACAT TGCGCCAATA
GCCTTCGGCA AGAAACAGCG CATCGCACTA GAGAATCCGG AGCGCTGCAT GGTCGCGGGC
AACAGGGCGT TACTGGCCTC ACTTGTTCGC AACCTGATCG ACAACGCCAT ACGCTACAGC
CCCGCCGAGG CACAAATCGT CGTGACGGTC GCGCACCGTA ACGGAAGTGC CGCGCTTTGT
GTGGAAGACA GCGGCCCCGG ACTCCCCGCC GCCGAACAGC ACCGACTTGG CGAGCGCTTT
TTCCGTGTCG AGGGAACGGA CCAGAGTGGT AGCGGCCTTG GATGGTCGAT CGTGCACCGG
ATCGCGGCGG TTCACGGTGC AAGCGTAACG GTTGACCGCT CGCCGGGTCT CGGGGGATTG
CGCGTCGACG TTATCTGGTC GAACCTCACA TCCAGTGGGT CCGGAACCCA CCAATAG
 
Protein sequence
MTRPRSLQGR LVLLVLGAVA GLWLITALIT WYDAQDEIDQ LLDSHLAQAG ALLVMQHAQA 
VDEDDEPSHD LPVQHRYAPK VAFQVFHEGK LGIHSANAPN QPMVAPGERT ASGFSTVQIG
GNAWRVFVAQ GVYKDIQVYV GERIDSRTAI LSALLRNMLW PMALALPLLA LAVWWAVKRG
MLPLRRLGNA LAERDPRALD PVRMPHAPVE MTPMLDALNA LFARIQTMLD AERRFTADAA
HELRTPIAAI KAQAQVAMAA EEDAMRRHAL VGTLEGCDRA AHLVDQLLLL SRLEANAGIS
IEPIDLGALA RQVMADIAPI AFGKKQRIAL ENPERCMVAG NRALLASLVR NLIDNAIRYS
PAEAQIVVTV AHRNGSAALC VEDSGPGLPA AEQHRLGERF FRVEGTDQSG SGLGWSIVHR
IAAVHGASVT VDRSPGLGGL RVDVIWSNLT SSGSGTHQ