Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0576 |
Symbol | |
ID | 6287628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 608749 |
End bp | 610125 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642624137 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001898159 |
Protein GI | 187927672 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.176736 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGCGAC CGCGCTCGCT CCAAGGTCGG CTGGTGTTGT TGGTGCTTGG CGCCGTCGCC GGCCTATGGC TCATCACCGC ATTGATCACG TGGTACGACG CCCAGGACGA GATCGATCAA CTGCTGGACA GTCATCTAGC GCAAGCTGGT GCGCTACTGG TCATGCAGCA CGCACAGGCC GTCGACGAGG ACGATGAGCC GAGTCACGAC CTGCCTGTCC AGCATCGTTA CGCGCCCAAA GTCGCCTTTC AGGTCTTTCA CGAAGGGAAG CTGGGCATCC ACTCGGCCAA CGCGCCGAAC CAGCCGATGG TTGCGCCAGG CGAGCGCACC GCGTCCGGAT TCTCTACGGT GCAAATCGGA GGCAATGCTT GGCGTGTCTT TGTAGCGCAG GGAGTCTACA AGGACATCCA GGTCTACGTT GGCGAGCGCA TCGACTCGCG CACCGCAATC CTGTCCGCCC TCTTGCGCAA CATGCTGTGG CCGATGGCGT TGGCGTTGCC GTTACTCGCC TTGGCCGTCT GGTGGGCGGT CAAGCGCGGG ATGCTGCCGC TGCGCAGATT GGGTAACGCG CTTGCCGAGC GTGACCCGCG AGCACTCGAT CCGGTCCGGA TGCCCCATGC GCCGGTTGAG ATGACGCCCA TGCTCGACGC GCTCAACGCG CTCTTTGCCC GCATTCAGAC CATGCTCGAC GCCGAGCGCC GCTTCACTGC CGACGCCGCC CACGAATTGC GCACGCCGAT TGCCGCAATC AAGGCCCAGG CCCAGGTGGC AATGGCCGCC GAAGAGGACG CCATGCGTCG CCACGCCTTG GTGGGAACGT TGGAAGGATG CGATCGCGCT GCCCATCTGG TCGACCAATT GCTGTTGCTT TCGCGTCTGG AAGCGAACGC CGGCATTTCG ATTGAACCGA TCGACCTTGG TGCGCTGGCT AGACAAGTGA TGGCAGACAT TGCGCCAATA GCCTTCGGCA AGAAACAGCG CATCGCACTA GAGAATCCGG AGCGCTGCAT GGTCGCGGGC AACAGGGCGT TACTGGCCTC ACTTGTTCGC AACCTGATCG ACAACGCCAT ACGCTACAGC CCCGCCGAGG CACAAATCGT CGTGACGGTC GCGCACCGTA ACGGAAGTGC CGCGCTTTGT GTGGAAGACA GCGGCCCCGG ACTCCCCGCC GCCGAACAGC ACCGACTTGG CGAGCGCTTT TTCCGTGTCG AGGGAACGGA CCAGAGTGGT AGCGGCCTTG GATGGTCGAT CGTGCACCGG ATCGCGGCGG TTCACGGTGC AAGCGTAACG GTTGACCGCT CGCCGGGTCT CGGGGGATTG CGCGTCGACG TTATCTGGTC GAACCTCACA TCCAGTGGGT CCGGAACCCA CCAATAG
|
Protein sequence | MTRPRSLQGR LVLLVLGAVA GLWLITALIT WYDAQDEIDQ LLDSHLAQAG ALLVMQHAQA VDEDDEPSHD LPVQHRYAPK VAFQVFHEGK LGIHSANAPN QPMVAPGERT ASGFSTVQIG GNAWRVFVAQ GVYKDIQVYV GERIDSRTAI LSALLRNMLW PMALALPLLA LAVWWAVKRG MLPLRRLGNA LAERDPRALD PVRMPHAPVE MTPMLDALNA LFARIQTMLD AERRFTADAA HELRTPIAAI KAQAQVAMAA EEDAMRRHAL VGTLEGCDRA AHLVDQLLLL SRLEANAGIS IEPIDLGALA RQVMADIAPI AFGKKQRIAL ENPERCMVAG NRALLASLVR NLIDNAIRYS PAEAQIVVTV AHRNGSAALC VEDSGPGLPA AEQHRLGERF FRVEGTDQSG SGLGWSIVHR IAAVHGASVT VDRSPGLGGL RVDVIWSNLT SSGSGTHQ
|
| |