Gene Rpic_0574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0574 
Symbol 
ID6287626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp607315 
End bp608046 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content64% 
IMG OID642624135 
Productcytochrome B561 
Protein accessionYP_001898157 
Protein GI187927670 
COG category[C] Energy production and conversion 
COG ID[COG3658] Cytochrome b 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.599646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.211296 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACAA TGTCCGCATC CCGCGCTGAA GCCATGAAAA CCGATTCCAT CACCCGCCGC 
ATCCTGGTTT GGGATGCGCC GACCCGCCTC TTTCACTGGC TGCTGGCGCT GAGCTTCCTG
GGTGCCTACT TGACCGCGGA AAGTGAGCAG TGGCGCCTTG TCCACATCAC ACTCGGATAC
ACGATGGCGG CGCTGGTCGG CTTTCGACTG GTGTGGGGCA TGGTGGGCAC GCGATACGCT
AGGTTTTCCA GCTTCGTACG GTCCCCCGCT GCCGCACTCC GCTATTTGAC CAGCATCCTG
CGCGGGCGGC CGGAGCACCA TATTGACCAC AACCCCGCTG GTGCGCTTGC TATCATCGCC
TTGCTGCTGA TGGCGTGCGG CCTGGCAGGA ACGGGCTGGG CCACCTACAA CGATGTCGGC
GGTGACTGGC TCGGCGAACT GCACGAGGGC TTCGCCAACG CAATGCTTGC ACTGGTGGGC
ATTCATGTTC TCGCCGTCTT TGCCAGCAGT TGGCTGCACC GTGAGAATCT GGTTGGCGCG
ATGATCAGCG GACGCAAGAC CGGCCTGCCG AACGAGGGCA TCCGCCGTGC GTGGTCGAGT
GTCGCGGGCC TGATGTTGGT GGCTGTGCTG GGCTTCTGGT GGACGCAGTG GCAGTCCGCG
CCGCCGGCCG GGGTCACTGA CCGTCCCGCG GCCTCCGCGA AGCATCACGA CGCCGACCGC
GACGACTATT GA
 
Protein sequence
MNTMSASRAE AMKTDSITRR ILVWDAPTRL FHWLLALSFL GAYLTAESEQ WRLVHITLGY 
TMAALVGFRL VWGMVGTRYA RFSSFVRSPA AALRYLTSIL RGRPEHHIDH NPAGALAIIA
LLLMACGLAG TGWATYNDVG GDWLGELHEG FANAMLALVG IHVLAVFASS WLHRENLVGA
MISGRKTGLP NEGIRRAWSS VAGLMLVAVL GFWWTQWQSA PPAGVTDRPA ASAKHHDADR
DDY