Gene Rpic_0565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0565 
Symbol 
ID6287520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp600353 
End bp601522 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content63% 
IMG OID642624127 
Productiron-containing alcohol dehydrogenase 
Protein accessionYP_001898149 
Protein GI187927662 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.79087 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCCA CCTACCATTT CCAGACCGTC AAGCACATCG TCCACGGCGC AGGCAGTCTG 
GCATTGCTGC CCGAAAAGCT CGCGCTGCTT GATGTGCCCG TCAAACGCAT CGCACTCATC
ACCCAACCGG TGATGGAGCA GAACGGCGTG ATCGGCCGCG TGGTGCAAGC GCTGGCCGCG
CGCGACATCG AGGCGCGCAT CGTACGCGGC GTCGAACCGG AACCGACGAT TGAGAACGTC
GAGACCGTCT TCCGCGAGCA GATCGCGCCG TTTGCGCCGG ATGCCATCCT GTCAATCGGT
GGCGGCAGCG TGCTGGATGC GGCCAAGCTG TTTGCAGTGC GCCTGACCAA CGAACAGCCG
CTGCGCGAAT GGCTCGGCAT TGATCTGATC AAGCGCCCCG GCATTCCGCT GGTGTTGGTC
CCAACCACGG CGGGCACGGG TTCTGAAGTC ACGCCCAACG CCATCGTCAC GCTGCCCGAT
GAAGAACTGA AGGTGGGCAT CGTCAGCCGA CATCTGCTGC CACAACTGGT GATTCTCGAT
GCGGAACTGA CCTTCGACCT GCCCAAACCG ATCACGGCAG CCACGGGCAT CGACGCATTC
GTGCATTCGC TGGAGTCGTA TATCTCGACC AAGGCCAACC CGGTGAGCGA CATGTTTGCG
ATGGAGTCGA TGCGGCTCAT CGGCGCGAAC CTTGTCGAGG CATATCAGAA CGGCCGCTCG
GTCAAGGCGC GCGAGGCGAT GATGCTGGGT TCGATGTACG GCGGCCTGGC GCTGACCGCC
GCCGGCACGG CCGCCGTGCA TGCGCTGGCG TATCCGCTCG GTGGCATGTT CGGCATTACG
CACGGTGTGG CCAACGCGAT GCTGTTGCCG CACGTAATGT CGTTCAACAA GGATGCCATC
GTCGGGCGGC TGGCCAACGT GGCACGTGCA CTGGACATCA GCAGCCATGA CAGTGACGAC
GAGACCGCCG CCGATGCGCT CATCGAACGG CTGACCGAGT GGACCGACGT TGTGCAGATT
CCGCAGGACT TGCGCCAGTT CGGCGTGTCG GAAACGCACC TGGACGTGCT GGCCGAGGCC
GCGTCGAAGG TCAAGCGTCT GCTGGGCAAC AACCCCAAGC CGCTGAGCCA CGCAGACATC
AAGGCTATCT ACCAGCGCCT GCTGCCGTGA
 
Protein sequence
MSSTYHFQTV KHIVHGAGSL ALLPEKLALL DVPVKRIALI TQPVMEQNGV IGRVVQALAA 
RDIEARIVRG VEPEPTIENV ETVFREQIAP FAPDAILSIG GGSVLDAAKL FAVRLTNEQP
LREWLGIDLI KRPGIPLVLV PTTAGTGSEV TPNAIVTLPD EELKVGIVSR HLLPQLVILD
AELTFDLPKP ITAATGIDAF VHSLESYIST KANPVSDMFA MESMRLIGAN LVEAYQNGRS
VKAREAMMLG SMYGGLALTA AGTAAVHALA YPLGGMFGIT HGVANAMLLP HVMSFNKDAI
VGRLANVARA LDISSHDSDD ETAADALIER LTEWTDVVQI PQDLRQFGVS ETHLDVLAEA
ASKVKRLLGN NPKPLSHADI KAIYQRLLP