| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0543 |
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| Symbol | |
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| ID | 6289701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 582045 |
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| End bp | 583340 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642624108 |
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| Product | metabolite/H+ symporter, major facilitator superfamily (MFS) |
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| Protein accession | YP_001898130 |
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| Protein GI | 187927643 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCCCC CGTCCAGCCT TTCGACCGGG CAATCCAAGG CCGCTGCGGT CTTCCGCGTC
ACCGCCGGGA ATTTCCTGGA GCAGTTCGAT TTCTTCCTGT TCGGCTTTTA CGCCACGCAG
ATTGCCAACG TCTTCTTTCC GACCGAAAGC GAATTCGCCT CGCTGATGAT GACGTTCGCT
GTTTTTGGGG CTGGGTTCCT CATGCGCCCG CTGGGCGCAG TCGTGCTCGG CGCCTACATT
GACGATGTCG GTCGCCGAAA GGGCCTGATC GTCACGCTGT CGATCATGGC AAGCGGGACC
GTGCTGATTG CGTTTGTTCC CGGCTACGCC ACGATCGGCC TGCTGGCACC GGCGCTCGTG
TTGCTGGGGC GTCTATTGCA GGGTTTCTCG GCGGGCGCGG AACTGGGCGG CGTATCGGTG
TATCTGGCCG AGATGGCCAC GCCCGGCCGC AAGGGTTTTT TCACGAGCTG GCAGTCCGCC
AGCCAGCAGG TCGCAATCGT CGTAGCGGCG GGCCTGGGCT TCGCGCTCAA CCAAGGGCTG
AGCGCACCGG CCATCGCCGC ATGGGGATGG CGTGTGCCGT TTTTCGTCGG TTGCATGATC
GTGCCGTTCA TCTTCGTGCT GCGCCGTAAT CTTGAAGAAA CGCAGGAGTT CAAGGCACGC
AAGCATCGTC CGAGCATGAA GGACGTACTC AGCACGCTGG TGCAGAACTG GGGCGTCGTC
ATCGCCGGCA TGATGCTGGT GGCGATGACG ACCACGAGCT TCTACCTCAT CACGGTGTAT
GCGCCCACGT TCGGGAAGAC GGTCCTGCAC CTCAGCACGG CCGACAGCCT GCTCGTCACG
CTCTGCGTGG GGGTGTCGAA CTTCGTGTGG CTGCCGATTG GCGGTGCGCT CTCCGACAGG
ATTGGCCGTC GGCCACTGCT CATCGGCATG ACGGTGCTGA CCATCGCCAC TGCGTATCCG
GCGCTTTCGT TTCTCGCGCA CGCGCCGAGC TTCATGAATA TGCTGCTCGT GCTGCTCTGG
CTGTCGTTCA TGTACGGCAT CTACAACGGC GCGATGATCG TTGCGCTCAC GGAGGTGATG
CCCGTGCAGG TGCGCGTTGC AGGGTTCTCG CTCGCCTACA GCTTGGCGAC GGCGGTATTC
GGCGGCTTCA CCCCCGCCAT CTCGACAGCG GCCATTCATA TGACCGGCGA CAAGGCGGCC
CCTGGCTACT GGATGAGTCT TGCCGCCGTG TGCGCTCTCC TGGCGACGTT GACGCTCTAT
CGCCGCCGCG CGGTGACGTT GGCTCCGGCG CACTGA
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| Protein sequence | MHPPSSLSTG QSKAAAVFRV TAGNFLEQFD FFLFGFYATQ IANVFFPTES EFASLMMTFA
VFGAGFLMRP LGAVVLGAYI DDVGRRKGLI VTLSIMASGT VLIAFVPGYA TIGLLAPALV
LLGRLLQGFS AGAELGGVSV YLAEMATPGR KGFFTSWQSA SQQVAIVVAA GLGFALNQGL
SAPAIAAWGW RVPFFVGCMI VPFIFVLRRN LEETQEFKAR KHRPSMKDVL STLVQNWGVV
IAGMMLVAMT TTSFYLITVY APTFGKTVLH LSTADSLLVT LCVGVSNFVW LPIGGALSDR
IGRRPLLIGM TVLTIATAYP ALSFLAHAPS FMNMLLVLLW LSFMYGIYNG AMIVALTEVM
PVQVRVAGFS LAYSLATAVF GGFTPAISTA AIHMTGDKAA PGYWMSLAAV CALLATLTLY
RRRAVTLAPA H
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