| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0530 |
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| Symbol | |
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| ID | 6289601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 565932 |
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| End bp | 567575 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642624095 |
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| Product | Mammalian cell entry related domain protein |
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| Protein accession | YP_001898117 |
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| Protein GI | 187927630 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3008] Paraquat-inducible protein B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACC CCGTCGATAA CGAAAACATT CCCGCGCCGC GCCGCATGAA GCGCAAGCGC
TGGCTGCCCT CTCTGATCTG GCTGGTGCCG ATCGTGGCGC TTACGGTGGG CGCCACGCTC
ATGGCGCGCG TGATCCTGGC GCGCGGCGCG CAAGTGACTG TCACGTTCAG CTCGGCCGAG
GGCATTGAGG CAGGCAAGAC GCGCGTGAAA TACAAGAGCG TCGATATCGG CGTGGTCAAG
GCAGTGGGGC TCACCGACGA CCGCTCTGGC GCCGTGGTGC TGATCGAACT CACGCATGAC
GGCAAGGCGT TTGCCGCGTC CGACACGCGG TTCTGGGTGG TGCGCCCGCG CGTGGCGGCC
GGCAGCATCT CGGGGCTCGG CACGCTGCTC TCCGGCGCGT ACATCGGCGT GGACGGCGGC
AGCTCACAGG AGAAGAAATC CACCTTCAAG GGCCTCGATA CACCGCCGGC CATCTCCGCG
GATGCGCCGG GCAAACAGTT CACGCTGCAT GCGCCCGACC TGGGCTCGCT CGATATCGGC
GCGCCGGTGT ATTTCCGCCG CGTGCGTGTG GGCCAGGTCA CCGCCTATGA CATCGACACC
GACGGCAAGG GCGTGACGTT GCACATCTTC GTCAACGCGC CGTTCGACAA GTTCGTGGCG
CGCGGCACGC GGTTCTGGAA CGCCAGCGGT ATCGACCTCA AGCTCGACGC CAACGGACTG
AAGGTCGATA CACAATCGCT GCTGACCGTG GCGCTCGGCG GCATCGCGTT CCAGACACCC
GAAGAAGCCG ATCACGAGCC GGCTGCCTCC GATGCGCAGT TCCAGCTCGT GCGCAACGAA
ACCGCGGCGC TGAAGGACCC GGAACACCTG TCGCAGACCG TGGTGATGTA CTTCCACCGC
TCGCTGCGCG GGCTCAACGT AGGCGCGCCG GTGGAGTTCA AGGGCATCAA CGTGGGCGAG
ATCAAGTCGA TCGGCATCCA CTACAGCAAG AAGCGCCACG AGTTCGTGCT GCCGGTCACG
GCCACGCTGT ACCCCACCCG CTTCGGCATG GACATCCGCG ACGACAACCC TCAGCACGCC
GCCGAAGACG TCCGCACGCA GTTCGACGTG CTGGTGAAGA ACGGCATGCG CGCGCAGCTG
AAGAGCGCGA GCCTGCTGAC GGGCCAGCAG TTCGTGAACC TCGACTTCAT CGACACGGCC
GAGCGCGAGA AGACCGCGCC ACGCTTCGGC ATGCGCGATC GCGACGGTGC GTATGTGTTC
CCGACGGCCG ACAACCCCAC GGACGATATC GAAGCGCAGA TTGCCGGCAT CGCCAAGAAG
CTCAACAAGG TGCCGTTCGA GCAGATCGGA CAAGACGTCC ACCGCACACT CACAACGCTC
GACGCTACGC TCAAGCAGAC CGAGCAACTG GCCAAGACCG TCAACAGCGA TCTCGCCCCG
CAGATGAAGG AAACGCTGGC CGAGGCACGC CGCACGCTCG ACTCTGCGCG GCAGGTCTTC
TCCGACGATG CCCCGCTGCA ACGCAATGCG CGCGACACGC TGGAACAGGT GGCCAAGGCC
GCCGCGTCCG TGCGCGTGCT GACCGACTAT CTGGACCGCC ACCCGGAAGC GCTGATCCGC
GGCAAGGCAA AGGACGCGCA ATGA
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| Protein sequence | MTDPVDNENI PAPRRMKRKR WLPSLIWLVP IVALTVGATL MARVILARGA QVTVTFSSAE
GIEAGKTRVK YKSVDIGVVK AVGLTDDRSG AVVLIELTHD GKAFAASDTR FWVVRPRVAA
GSISGLGTLL SGAYIGVDGG SSQEKKSTFK GLDTPPAISA DAPGKQFTLH APDLGSLDIG
APVYFRRVRV GQVTAYDIDT DGKGVTLHIF VNAPFDKFVA RGTRFWNASG IDLKLDANGL
KVDTQSLLTV ALGGIAFQTP EEADHEPAAS DAQFQLVRNE TAALKDPEHL SQTVVMYFHR
SLRGLNVGAP VEFKGINVGE IKSIGIHYSK KRHEFVLPVT ATLYPTRFGM DIRDDNPQHA
AEDVRTQFDV LVKNGMRAQL KSASLLTGQQ FVNLDFIDTA EREKTAPRFG MRDRDGAYVF
PTADNPTDDI EAQIAGIAKK LNKVPFEQIG QDVHRTLTTL DATLKQTEQL AKTVNSDLAP
QMKETLAEAR RTLDSARQVF SDDAPLQRNA RDTLEQVAKA AASVRVLTDY LDRHPEALIR
GKAKDAQ
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