Gene Rpic_0518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0518 
Symbol 
ID6287701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp555755 
End bp556975 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content64% 
IMG OID642624083 
Productmetal dependent phosphohydrolase 
Protein accessionYP_001898105 
Protein GI187927618 
COG category[T] Signal transduction mechanisms 
COG ID[COG2206] HD-GYP domain 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.454264 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGAA TCGATGCGAG CCAATTGCGT GTCGGCATGT TTGTGATGAA GCTGGGCGGG 
TCCTGGCTCA AGCATCCGTT CTGGCGTGCG CAATTCCAGT TGTCCCACCA GGGTCAGATC
GACGACATCC GCCGCGCGGG TATCACCGAG ATCTGGATCG ACCCCGAGCG CGGCGAAGAC
GTCATGTCGG AGACGCTGAT GCCCGCCCCG GCTCCGGCCC CGGCACCCGC GCCCGAGCCG
CTCACGCGCG AAACCCTGGC CGCGCGGCCG CCGCTCACGC CGACGTCGCT CAAGGAAGAG
TGGAAGCACG CCCAGCAGCT GATGCAGAAC GGCAAGGCGA CGCTTGGCCA CATGTTTGCC
GAAGCGCGCA TGGGCCGTGC GCTGGAAACC GAAAAGGCGC TGCTGCTGGT GGATGACGTG
TCGAACTCGC TGGCACGCAA CTCCTACGCG CTGATTGCGC TGGCGCGGCT GAAGAACAAG
GACGACTACA CCTACCTGCA TTCGTTTGCC GTGTGTGCGT TGATGGTGGC GCTGGCCAAG
ACGCTGGGGC TGCCTGAAGA CGAGATTCGC GAATGCGGGC TGGGCGGGCT GGTGCACGAC
ATCGGCAAAT CCGCCATGCC GCGCACGCTG CTCGACAAGA GCACCGCGCT CACCAAGGAC
GAGCTGGCGC TGCTGCAGAC GCACGCCGTG GGCGGCCATC ACCTGCTGCA GGGTACCGGC
CAGTTCAGCG AGATTGCGCG CGAGATCTGC CTGCACCACC ATGAGCGCAT TGACGGCAGC
GGCTATCCCG ACGCCCAGAA GGCCGACGGC ATCAGCCTGT GGGCCAAGAT GGGCGCCATT
TGCGATGTGT ACGACACGCT CACGTCGAGC AGCCCGTACC ACCATGCGTG GTCTCCCGCG
CAGGCGCTGA AATACATGAT GGCGCGCACA GACACGCAGT TCGACCGGAC CGTGTTCCAG
GCCTTCACGC GCAGCGTGGG CATTTACCCG GTGGGCACGC TGGTCAAACT GCGCACTAAC
CGGCTGGGTG TGGTAGTCCA CCAGAACGAT GCGTCTGCGC TCAAGCCGGA TGTGGTCGTT
TTCTATTCGG GCAACACCAA GACGCGCGTG CGCCCCGAGC GCATCAGTTT GGGCAAGTCC
GACGATTCGA TCGTCACCGT GGAAGACGCC ACCACCTGGG GTTTGTCGGA CGAGGAAGTC
TCCGACATGT GCCTGGTCTG A
 
Protein sequence
MKRIDASQLR VGMFVMKLGG SWLKHPFWRA QFQLSHQGQI DDIRRAGITE IWIDPERGED 
VMSETLMPAP APAPAPAPEP LTRETLAARP PLTPTSLKEE WKHAQQLMQN GKATLGHMFA
EARMGRALET EKALLLVDDV SNSLARNSYA LIALARLKNK DDYTYLHSFA VCALMVALAK
TLGLPEDEIR ECGLGGLVHD IGKSAMPRTL LDKSTALTKD ELALLQTHAV GGHHLLQGTG
QFSEIAREIC LHHHERIDGS GYPDAQKADG ISLWAKMGAI CDVYDTLTSS SPYHHAWSPA
QALKYMMART DTQFDRTVFQ AFTRSVGIYP VGTLVKLRTN RLGVVVHQND ASALKPDVVV
FYSGNTKTRV RPERISLGKS DDSIVTVEDA TTWGLSDEEV SDMCLV