Gene Rpic_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0516 
Symbol 
ID6287252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp554472 
End bp554987 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content67% 
IMG OID642624081 
Producttranscriptional regulator, MarR family 
Protein accessionYP_001898103 
Protein GI187927616 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.398648 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGCA CGCCCAAAGC CGACGACCTG TATCCCGCCG TGGCCCCTTC GGGGCATTTC 
AACCCGCATC TGGCGGACGT GGAGTATGGC GCGCTCGATG GGCTGGTCGG CTATGCCGTG
CGCCGCGCGC AGCTGCACAT CTACGAAGAT TTCGTGCGCT CCCTGCAGAC GTGGCACATC
ACGCCGCCGC GCTTCTCGGC CATGACCGTG ATCGCGCACA ACCCGAACCT CAAGCTGACC
GAGCTGGCCA ACATCTTGGG CGTGGCACGC TCCGGTGCGG TGCTGCTGGT CGATACGCTG
GAAGACATGG GCATGGTCGA GCGCCAGCCC TCGCCCAAGG ACAAGCGCGC GTTCCGGCTC
GTGCTGACCG CCAAGGGCGC GACTACCCTC GACGACATCA CCCGGGCCGT CACCGCGCAC
GATGCCCGCG TGACCGCGCA TCTTTCGACC GACGAGCGAT ACACGCTGCT GGCGCTGCTC
AACAAGCTGG CCTCGGGGCC GGATTCTGCT TCCTGA
 
Protein sequence
MPRTPKADDL YPAVAPSGHF NPHLADVEYG ALDGLVGYAV RRAQLHIYED FVRSLQTWHI 
TPPRFSAMTV IAHNPNLKLT ELANILGVAR SGAVLLVDTL EDMGMVERQP SPKDKRAFRL
VLTAKGATTL DDITRAVTAH DARVTAHLST DERYTLLALL NKLASGPDSA S