Gene Rpic_0513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0513 
Symbol 
ID6287249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp551062 
End bp551778 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content67% 
IMG OID642624078 
Producttranscriptional regulator, GntR family 
Protein accessionYP_001898100 
Protein GI187927613 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.332909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.319587 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGTC CCATCAAGCT GGTTTCAGGC GCCGCCAAAC CCGCGCCCGC ACCGTTTGCC 
GTTGAGCCGG CAGCCCATGC GCCCAAGGGC GCCGCCATGC GTGAACTCGC CTACAACGAG
ATCAAGCGCC GCATCATGGC GTGCGAATTC CGCCCCGGCG AGCCGCTCAA CGAAGCACAG
CTCGGCGCGC TTCTCGGGCT GGGCCGCACG CCCATCCACC AGGCGCTGCA TCGTCTGGAG
GTGGAAGGGC TGGTGCAGAT CCTGCCGCGC AAGGGCGTGC TGGTGACGCC GCTGTCGCTC
AACGACGTGC TCGACATGAT CGAGGTGCGC GCCACCAACG AGATCCTGTG CGTAACGCTG
GCCGCCGAGC GTGCCCACCC GGCCGATTTC GAGGCCATGC GCGCCATCGT CGAAGCATCG
CCCGCGCTGA TCGAGCACCG GGACATTGCC GCGCTGGCCG CGCTGGACCT CAAGTTCCAT
CTCGCCATTT CCGCTGCCTC GCGCAACCGC GTGCTGGCCG AACTGCTGCG CGGCCTGCAC
GAGAAGCAGG CGCGCTTCTG GTTCCTCTCG CTTTCAGAGC CGCAACACCT GCAGAACGTG
TACGACGAGC ACCTTGCCGT GCTCGATGCG CTGGAGCGCC GCGATGTGCC CGCAGCGCGC
GAAGCCATTC GCGAGCACAT CGACGAGTTC CGCCGCACGA TCATCCGCAC GCTCTGA
 
Protein sequence
MSRPIKLVSG AAKPAPAPFA VEPAAHAPKG AAMRELAYNE IKRRIMACEF RPGEPLNEAQ 
LGALLGLGRT PIHQALHRLE VEGLVQILPR KGVLVTPLSL NDVLDMIEVR ATNEILCVTL
AAERAHPADF EAMRAIVEAS PALIEHRDIA ALAALDLKFH LAISAASRNR VLAELLRGLH
EKQARFWFLS LSEPQHLQNV YDEHLAVLDA LERRDVPAAR EAIREHIDEF RRTIIRTL