Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0513 |
Symbol | |
ID | 6287249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 551062 |
End bp | 551778 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642624078 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_001898100 |
Protein GI | 187927613 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.332909 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.319587 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCGTC CCATCAAGCT GGTTTCAGGC GCCGCCAAAC CCGCGCCCGC ACCGTTTGCC GTTGAGCCGG CAGCCCATGC GCCCAAGGGC GCCGCCATGC GTGAACTCGC CTACAACGAG ATCAAGCGCC GCATCATGGC GTGCGAATTC CGCCCCGGCG AGCCGCTCAA CGAAGCACAG CTCGGCGCGC TTCTCGGGCT GGGCCGCACG CCCATCCACC AGGCGCTGCA TCGTCTGGAG GTGGAAGGGC TGGTGCAGAT CCTGCCGCGC AAGGGCGTGC TGGTGACGCC GCTGTCGCTC AACGACGTGC TCGACATGAT CGAGGTGCGC GCCACCAACG AGATCCTGTG CGTAACGCTG GCCGCCGAGC GTGCCCACCC GGCCGATTTC GAGGCCATGC GCGCCATCGT CGAAGCATCG CCCGCGCTGA TCGAGCACCG GGACATTGCC GCGCTGGCCG CGCTGGACCT CAAGTTCCAT CTCGCCATTT CCGCTGCCTC GCGCAACCGC GTGCTGGCCG AACTGCTGCG CGGCCTGCAC GAGAAGCAGG CGCGCTTCTG GTTCCTCTCG CTTTCAGAGC CGCAACACCT GCAGAACGTG TACGACGAGC ACCTTGCCGT GCTCGATGCG CTGGAGCGCC GCGATGTGCC CGCAGCGCGC GAAGCCATTC GCGAGCACAT CGACGAGTTC CGCCGCACGA TCATCCGCAC GCTCTGA
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Protein sequence | MSRPIKLVSG AAKPAPAPFA VEPAAHAPKG AAMRELAYNE IKRRIMACEF RPGEPLNEAQ LGALLGLGRT PIHQALHRLE VEGLVQILPR KGVLVTPLSL NDVLDMIEVR ATNEILCVTL AAERAHPADF EAMRAIVEAS PALIEHRDIA ALAALDLKFH LAISAASRNR VLAELLRGLH EKQARFWFLS LSEPQHLQNV YDEHLAVLDA LERRDVPAAR EAIREHIDEF RRTIIRTL
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