| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0486 |
|---|
| Symbol | |
|---|
| ID | 6288155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 519067 |
|---|
| End bp | 520092 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642624051 |
|---|
| Product | lipopolysaccharide heptosyltransferase II |
|---|
| Protein accession | YP_001898073 |
|---|
| Protein GI | 187927586 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
|---|
| TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.109958 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGCA AGATCCTCGT CGTCGCCCCC AACTGGATCG GTGATGCGCT GATGGCGCAG
CCGCTGTTTG CGCAGCTCAA GGCGCGGCAC CCGCGCGCGC AGATCCACGC CATTGCCCCG
AAATGGGTCG CGCCCGTGCT CGCGCGCATG CCGGAAATCG CGCGCGTACT GCCCACCGAA
CTTGCCCACG GCAAGCTGCA GCTCGGCAGC CGCACGATGT TCGCGCAGCA GCTCAAGGGC
GAAACCTTCG ACGCAGCCTA TGTGCTGCCG AACTCGTTCA AGAGCGCGCT GATCCCGTGG
CTGGCCGGCA TTCCGCTGCG TATCGGCTAC AAGGGCGAGT CGCGGCTGGG CGTGCTGAAC
GTGCGCTACC CGAATCCGCC CAAGAATGCG CGTCCGCCGA TGGTGCAGCA CTACGCGGCG
CTGGCTTTCA AGCCCCATGC CAAGCTGCCC GACACGCTGC CCGACCCGAA GCTGGACGTT
GATGTGCAGC GCGTGGCAGC CACGTCCGCC AAGTTCGGCA TTCCTGGCAA CGCGCGGCTG
ATTGCCTTCT GCCCCGGCGC GGAATACGGC CCAGCAAAGC GCTGGCCGGC CGAGCACTTC
GCAGAGCTGG CGCAGATGCT GCGCCGCTCG TTCCCGTACG CGCAGATCGT CGCGCTCGGT
TCGGGCAAGG ACCGCGAGAT GGCCAACGCC ATCGTCGAGC GCGCGCCGTT CGTGCGCAAC
CTGTGCGGCG AGACCTCGCT GGATGAAGCG ATCGAACTGC TCGCCCGCGC CGAAGCCGCC
ATCTGCAACG ACTCCGGCCT GATGCACGTG ACGGCTGCCC TGGGGCGCCC GCAGGTGGCC
GTGTTCGGCT CCAGCGACCC CCGCCACACG CCTCCGCTGT CGCCTGCTGC GAGTATCATG
TGGCTCCATC TGGAGTGCAG TCCGTGCTTT GCACGCGAAT GCCCGCTGGG CCACTTGCGC
TGCCTGCGCG ACATCGGCCC CGAGATGGTG TTTCATGAAT TGCGCCGGCT GCTGCAGCCG
CAGTAG
|
|---|
| Protein sequence | MMRKILVVAP NWIGDALMAQ PLFAQLKARH PRAQIHAIAP KWVAPVLARM PEIARVLPTE
LAHGKLQLGS RTMFAQQLKG ETFDAAYVLP NSFKSALIPW LAGIPLRIGY KGESRLGVLN
VRYPNPPKNA RPPMVQHYAA LAFKPHAKLP DTLPDPKLDV DVQRVAATSA KFGIPGNARL
IAFCPGAEYG PAKRWPAEHF AELAQMLRRS FPYAQIVALG SGKDREMANA IVERAPFVRN
LCGETSLDEA IELLARAEAA ICNDSGLMHV TAALGRPQVA VFGSSDPRHT PPLSPAASIM
WLHLECSPCF ARECPLGHLR CLRDIGPEMV FHELRRLLQP Q
|
|---|
| |