| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0480 |
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| Symbol | |
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| ID | 6288440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 514033 |
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| End bp | 514557 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642624045 |
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| Product | pilin subfamily protein |
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| Protein accession | YP_001898067 |
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| Protein GI | 187927580 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTTGC ATTACCAGTA CAACGGGCGA CACCAGCGCG GTTTTACTCT GATTGAGCTG
ATGATCGTTG TTGCGATTGT CGGTATTCTG GCGGCGATCG CCGTCCCCGC GTATCAAGAT
TACGTCACGC GCGCCCGCGT AAGCGAGGGG TTGGCCCTCG CAGCATCAGC CAAGACAACT
GTGGCCGAGA ACGCCAGCGC TGGGGTTCCG TTCGACGAGG GTTTCGCCGC AGACACGAAA
GCCACGCGCT ACGTCCAAGC GAAAGGCATC GTGATCAGTC AAAAGACTGG CGAAATTCAA
ATTAAATACA CTGATTCGGT AGCGAAAGAC GGTGAAAATG TCTTGTTGCT CAAGCCAACA
ACCTATGATG AAGCCATGAG CGGGTCAAGC GCGAGCAGTG TTCGCCCCAC AGGTCCAATT
CGTTGGGATT GCTATGCCAA GGGCGCCGCC GTCCGAGCAG GAACAGCCGA ACTTGAAACG
AAGCCGTCAT TGGCGACAAA TGTTGCACCT GCGGAATGCC GGTAA
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| Protein sequence | MQLHYQYNGR HQRGFTLIEL MIVVAIVGIL AAIAVPAYQD YVTRARVSEG LALAASAKTT
VAENASAGVP FDEGFAADTK ATRYVQAKGI VISQKTGEIQ IKYTDSVAKD GENVLLLKPT
TYDEAMSGSS ASSVRPTGPI RWDCYAKGAA VRAGTAELET KPSLATNVAP AECR
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