| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0478 |
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| Symbol | |
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| ID | 6288438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 511529 |
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| End bp | 512038 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642624043 |
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| Product | type 4 fimbrial pilin signal peptide protein |
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| Protein accession | YP_001898065 |
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| Protein GI | 187927578 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.322644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCGA TGCGTCGTCT GAACAAGCGG GTCCAGAAGG GCTTCACGCT GATCGAACTG
ATGATCGTGG TTGCAATCGT CGGTATTCTG GCTGCTATCG CCATTCCGGC GTATCAGGAC
TACACGATTC GTGCCCGCGT GACGGAAGGT CTGTCGCTGG CTGCTGCTGC CAAGGTGTTG
GTGGCCGAAA ACGCAGCCAA TGCACAAAGC GATCTGTCGG CTGGTTCCAC GGTGTTTGCG
GCTACGAAAA ACGTGAATAA CTTGGTCGTC TCGGGTACGG ATGGGCATAT CACGATTACC
TATGGCTCGG CCGTGTCCAC CTCTAACCCG ACGCTGACGC TCACGCCGTA TTTCACGGTT
GGCTCGACGA ACTCCAACCT GGCTCAAAGC TCCGCACCGG CCGCTCCGGT TCAGTGGAAG
TGCGCATCGG CAAGCGCAAC GGCGCCTACC GGCGTGACTG TGACGCTTGG CTCGCTGCCG
GCCAAGTGGG CACCGGCTGA GTGCCGCTAA
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| Protein sequence | MKSMRRLNKR VQKGFTLIEL MIVVAIVGIL AAIAIPAYQD YTIRARVTEG LSLAAAAKVL
VAENAANAQS DLSAGSTVFA ATKNVNNLVV SGTDGHITIT YGSAVSTSNP TLTLTPYFTV
GSTNSNLAQS SAPAAPVQWK CASASATAPT GVTVTLGSLP AKWAPAECR
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