| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0460 |
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| Symbol | |
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| ID | 6287082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 492274 |
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| End bp | 493035 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642624024 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_001898047 |
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| Protein GI | 187927560 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.343765 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTATCGC CGCTCTACAC GTTCGAGGGC TTGCTAACTG CAGGCTCACA TGCGGAGATC
GCAGCCTTCA TGGAACGCCA TGCGGGCAAC CTCGGCTATG GCCGATTCTT CTACTCGCCG
CTGCTCGTCG CCGGTGATGC CCGGCACTTT TTCAAGGACG ATCACAACGT CGTCGCAGCA
GAAATGCTGT ACACGAAAAA TATCTTCTCG ACCTACCCGG CCTCCTGGAT ACGCCGCTAT
CAGGAAGCCG GACATGTCGC CGCCGATCCT GTCGTCAAGC TAATCACGAC CAGCAACCTC
CCGATTCACT GGGATGCCGA CGATTTGCAG GCAGCGCGGA GTCCCGTGTT TGATGAGGCC
CGTGAGCACG GGCTGGCAAC CGGTATCACG ATACCGATCA ACGGTTTCGA CCACACTCGG
GCTTTGTTTA GCGTGACGTC CGATCAGGCT CCAGAACGTT CGCAACGCCA CACCGACGCG
ATATCCGGCC TCGCGGTACT GACTGCCCTG CATTTGCATG AAGCGGTACG GCGACTTGAT
GCGTCGATGT CCAACGCCCC GATCCCTTCG CTGACGTCAC GCGAGAAAGA ATGCCTGCAA
TGGGCAGCGG CGGGCAAAAC CTCGTGGGAA ATCGCACGCA TCCTCTCCGT CTCCGAGCGG
ACGGTGATCT TCCATATCGG GAATGCGACG AAGAAGCTCG GTGCCACAAA CCGTCGTCAG
GCGGTGGCTC GTGCCATCAG CCTTCGCCTG ATTGCTCCTT GA
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| Protein sequence | MVSPLYTFEG LLTAGSHAEI AAFMERHAGN LGYGRFFYSP LLVAGDARHF FKDDHNVVAA
EMLYTKNIFS TYPASWIRRY QEAGHVAADP VVKLITTSNL PIHWDADDLQ AARSPVFDEA
REHGLATGIT IPINGFDHTR ALFSVTSDQA PERSQRHTDA ISGLAVLTAL HLHEAVRRLD
ASMSNAPIPS LTSREKECLQ WAAAGKTSWE IARILSVSER TVIFHIGNAT KKLGATNRRQ
AVARAISLRL IAP
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