Gene Rpic_0421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0421 
Symbol 
ID6289781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp451546 
End bp452580 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content67% 
IMG OID642623987 
Productserine/threonine protein kinase 
Protein accessionYP_001898010 
Protein GI187927523 
COG category[R] General function prediction only 
COG ID[COG2334] Putative homoserine kinase type II (protein kinase fold) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.083044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.000109607 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCACGACG ATGGCCCACC CGCATCAGTT GACGCGCCCT ACGACGGCCT GACGCCCGAC 
AGCATCCTCG ATGCGCTGGC GCAGGTCGGG CTGATGCCGG ACGGCCGCAT GTTCGCGCTC
AACAGCTACG AGAACCGCGT CTACCAGGCC GGCGTGGAAG ATAGCGCGCC GGTGGTGGTC
AAGTTCTACC GCCCGGGCCG CTGGACCGAT GCGCAGATCG TCGAGGAACA CGCCTTCACG
GCAGAACTCG CAGCGGCGGA GATCCCCGTG GTCGCGCCGC TGGAAATCGA CGACCGCACG
CTGCACGCGT TCGAGCGTTG GCACTTCGCG GTCTTCCCGC GTTGCGCAGG CCGCGTGCCG
GCCATCGACC AAGACCACAC GCTTGAGTGG ATGGGCCGCT TCCTTGGCCG CATCCACGTC
GTGGGTGCGC GGCGGCCGTT CGTGGCCAGG CCCGCACTCG ACATCGACAC CTTCGGCGTG
CAATCGCGCG ACTGGCTGCT CGAACACGAT TTCATCCCGC CCGATTTGTT GCCGGCTTGG
CGCAGCGTGG CTGACGCCGC ACTCGACGGC GTGCGCCGCT GCTACGACCG CGCAGGCGAC
GTTTCATTGC TGCGCCTGCA CGGCGATTGC CACGCCTCGA ACGTGCTCTG GATCGAAGAG
GCCGACGCCA AGCAGGGCGA TCCACTGCGC AGCGCCGGTC CGCATTTCGT CGACTTTGAC
GACAGCCGCA CCGGCCCGGC CGTGCAGGAT CTGTGGATGC TGCTCTCGGG CGATCGCGCG
TCGATGCAAT CGCAGCTCGC CAGCCTGCTG GCCGGGTACG AGGACTTCTG CGAATTCGAC
ACGCGCGAGC TATATCTGGT CGAAGCGCTG CGCACGCTGC GCTTGCTGCA CTACAGCGCC
TGGTTGGCGC GTCGCTGGAA CGATCCGGCG TTTCCTGCAG CGTTTCCGTG GTTCAACACG
CAACGCTACT GGCAGGACCG GGTGTTGGAG TTGCGCGAGC AGATCGCGCT GTTGGACGAA
CCGCCGCTCT GGTGA
 
Protein sequence
MHDDGPPASV DAPYDGLTPD SILDALAQVG LMPDGRMFAL NSYENRVYQA GVEDSAPVVV 
KFYRPGRWTD AQIVEEHAFT AELAAAEIPV VAPLEIDDRT LHAFERWHFA VFPRCAGRVP
AIDQDHTLEW MGRFLGRIHV VGARRPFVAR PALDIDTFGV QSRDWLLEHD FIPPDLLPAW
RSVADAALDG VRRCYDRAGD VSLLRLHGDC HASNVLWIEE ADAKQGDPLR SAGPHFVDFD
DSRTGPAVQD LWMLLSGDRA SMQSQLASLL AGYEDFCEFD TRELYLVEAL RTLRLLHYSA
WLARRWNDPA FPAAFPWFNT QRYWQDRVLE LREQIALLDE PPLW