| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0417 |
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| Symbol | fadE |
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| ID | 6289253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 445428 |
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| End bp | 447938 |
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| Gene Length | 2511 bp |
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| Protein Length | 836 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642623984 |
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| Product | acyl-CoA dehydrogenase |
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| Protein accession | YP_001898007 |
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| Protein GI | 187927520 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.332729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.000590412 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGACGA TCTGGATCGT CCTGCTTTGC ATCGGCGTGC TTGGGCTCGC CAGCATGGAA
GCCTCGGCGT TCGCCTGGCT GGTCGCGACC GCCGTGTGGC TCGTGGCAGG CGCCTGGCTG
GGCTTGGTGG GCCCGGTGAT GACTACGGTA CTCGCCATCG TCTTTGTGCT GCCGGCGCTG
GTGCTCGCGC TCAAGCCGCT GCGCCGGGCA CTCATCACGC GCCCGGTACT GGCAATGTTC
CGCAAGATCA TGCCGGAGAT GTCGCAAACC GAGCGCGACG CCATTGAAGC GGGCACGGTC
TGGTGGGATG CCGAACTGTT CTCCGGCCGG CCCAACTGGT CGCGATTGCT GTCTTCGCCG
CAGCCGCGTC TGTCGGCCGA AGAGCAATCT TTCCTCGACG TGGAAACCGA AAAACTCTGC
GACCTTGCCA ACGATTGGGA AAGCACGCAG ATCTGGCAGG ACCTGTCGCC CGACGCGTGG
GACTATGCGA AGCGCGCCGG CTTCCTGGGC ATGATCATCC CGAAGGAATA CGGCGGCAAA
GGGTTCTCGG CATACGCTCA CTCGCAGGTC ATCATGAAGC TGTCGACGCG CTGCTCTGCC
GCGGCCGTGT CGGTCATGGT GCCCAACTCG CTCGGCCCCG CTGAGCTGCT TCTGCACTAC
GGCACCGAAG CGCAGAAAAA TCATTACCTG CCGCGCCTCG CACGCGGTGA AGAAATCCCC
TGCTTTGCGC TGACCAACGC ATATGCCGGC TCCGATGCCG CCGCCATTCC CGATGTGGGC
GTGGTCTGCC GCGGCGTGCA CGAAGGCCGC GAGACGCTCG GCTTTCGCGT GACATGGAGC
AAGCGCTACA TCACGCTCGG CCCCATCGCC ACGGTGCTGG GGCTCGCATT TCGCGCGGTC
GATCCGGATG GCTTGCTCGG CGGCGACAAG GAGCCCGGCA TTACCTGCGC GCTCATCCCG
ACGAAGCACC CGGGCGTAAA CATCGGCCGC CGCCATTGGC CGCTCAATGC GGTGTTCCAG
AACGGCCCGA ACTCCGGCAA GGACGTGTTC ATCCCCATCG ACTGGGTGAT CGGCGGCCAG
GCGCAAGTCG GCCGTGGCTG GCGCATGCTG ATGGAATGTC TGGCAGCGGG CCGGGCGATT
TCGCTGCCGT CGTCCAACGT GGGCATGGCC AAGCTGGCCG TGCGCAGCAC CGGCGCCTAT
GCCGCCGTGC GACGCCAGTT CCGTACGCCC ATCGGCAAGT TCGAAGGGAT TCAGGAAGCG
CTCGGCCGCA TGGGCGGCAA CCTGTACATG ATGGATGCGG CGCGGCGTCT TTCCGCGCTG
GCCGTGGACC TGGGCGAGAA GCCCTCGGTC ATCTCCGCCA TTGCCAAATA CCACGTCACC
GAACGTGCGC GCGATGTGGT CACCGATGCG ATGGACATCG TGGGCGGCAA GGGCATCTGC
ATGGGCCCGA ACAACTTCCT GGCGCGCGCT TATCAGCAGG TGCCGATCGC CATCACGGTG
GAAGGCGCGA ACATCATGAC GCGCTGCCTG ATCATCTTCG GGCAGGGCGT GATCCGTTGC
CATCCGTATG TGCTGCGCGA GATGACGGCC GCGCAAGGCG CCGATTCAAC CGAGACGCTG
CGTGCGTTCG ATACGGCGCT GTTCGGCCAC GGCGCATTCA TCGCGGGCAA CCTGGTGCGC
GCCTTTTTGC ATGCGCTCTC CGGCGGGCGC GTGGGAAGCG CGCCGGGCAA TGCCGCACCG
GAAATGCAGC GCTACTACCG CGCCGTGAAC CGCTTCTCGA CGGCGCTGGC GCTGCTGTCC
GATGTGTCGA TGTTCACGCT GGGCGGCACG CTCAAGCGCC GCGAGAGCAT CACGGGGCGG
CTGGGCGACA TCCTCTCGCA GATGTACCTG ATCTCGTCCG CGCTCAAACG CTTTGAAGAT
GACGGCCGCC CTGCCGAGGA CGCGCCGCTC GTGCATTGGT CGGTTCAGGA CGCGCTGGTG
AAGGCGCACG ATGCGCTCGA CGGCGTGCTG GCCAATTTCC CGAACACTGG CATCGCGGCG
CTGCTGCGCG CGCTGATCTT CCCGTTCGGT ACGCCGTATC GCAAGCCGTC GGATGCGCTG
GCCGCGCAGG TCGCCGAGCT GATGCAAACG CCGGGCGCTG TGCGCGATCG CCTGCTGGCC
GACTCGTACT GCCCGACGCC CGAAGTCGAC CCGATCGCCT ATGGCGAAGC GGCCTTCCGC
CTGCAGCCGG CCGTGGACGC AATCGAGCAG CGCTTGAAAC CAGCCATCCG CGCAGGCAAG
CTGCCGCCCG TGCCGCAGAG CCTGCCCGAC TTCGAAGCCT GGACCGCACA AGCCGTGGCA
CAAAACCTCA TTGACGAAGG CGAGCGAAAG CAGCTGTGCG ACTACGCGCG CTACGGCGAA
CACGCGGTTG CCGTGGATGA CTTCCCGCCC GACTTCAACC TGATGGCCGA CCTGCAGCGC
CGCAAGGATG CGCTCGATGC CCTGCAGGCC GCCGAGCGCC GCGCAGCCTG A
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| Protein sequence | MMTIWIVLLC IGVLGLASME ASAFAWLVAT AVWLVAGAWL GLVGPVMTTV LAIVFVLPAL
VLALKPLRRA LITRPVLAMF RKIMPEMSQT ERDAIEAGTV WWDAELFSGR PNWSRLLSSP
QPRLSAEEQS FLDVETEKLC DLANDWESTQ IWQDLSPDAW DYAKRAGFLG MIIPKEYGGK
GFSAYAHSQV IMKLSTRCSA AAVSVMVPNS LGPAELLLHY GTEAQKNHYL PRLARGEEIP
CFALTNAYAG SDAAAIPDVG VVCRGVHEGR ETLGFRVTWS KRYITLGPIA TVLGLAFRAV
DPDGLLGGDK EPGITCALIP TKHPGVNIGR RHWPLNAVFQ NGPNSGKDVF IPIDWVIGGQ
AQVGRGWRML MECLAAGRAI SLPSSNVGMA KLAVRSTGAY AAVRRQFRTP IGKFEGIQEA
LGRMGGNLYM MDAARRLSAL AVDLGEKPSV ISAIAKYHVT ERARDVVTDA MDIVGGKGIC
MGPNNFLARA YQQVPIAITV EGANIMTRCL IIFGQGVIRC HPYVLREMTA AQGADSTETL
RAFDTALFGH GAFIAGNLVR AFLHALSGGR VGSAPGNAAP EMQRYYRAVN RFSTALALLS
DVSMFTLGGT LKRRESITGR LGDILSQMYL ISSALKRFED DGRPAEDAPL VHWSVQDALV
KAHDALDGVL ANFPNTGIAA LLRALIFPFG TPYRKPSDAL AAQVAELMQT PGAVRDRLLA
DSYCPTPEVD PIAYGEAAFR LQPAVDAIEQ RLKPAIRAGK LPPVPQSLPD FEAWTAQAVA
QNLIDEGERK QLCDYARYGE HAVAVDDFPP DFNLMADLQR RKDALDALQA AERRAA
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