Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0415 |
Symbol | |
ID | 6289251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 443053 |
End bp | 443973 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642623982 |
Product | MaoC domain protein dehydratase |
Protein accession | YP_001898005 |
Protein GI | 187927518 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2030] Acyl dehydratase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00134356 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCGCACGC TGGCCCAGCC CTTTCCGATG GTCGCAACCC AGACGCTGGT AACCGAGCCG CCGTCGCCGG GGGCACTGGC CTGGCGCGCG CTGCTGTCGC AACGCAAAGG CAGGCGCGGC GGGCCGCTGC CGCGCCACAC CCTGGTGCGC CAGGAGGTGC CGCTCGAGGC CGAACACATT GCGCAGTACG CGGCGGTGTG TGGGTTCTCG CCCGCGCATG GCGTACCGAT GACGTATCCG CATCTGCTGG GCTTTTCGCT GCAGCTCATG CTGATGACGG AATCGGCGTT TCCGTATCCG GTGATCGGCC TCGTGCACCT GTGCAACACC ATCCGCCAGC ACCAGCGCCT GCAGGCGGGC GAACGCGTGC GCGTGGAAGT GCGCCCGCGC CGGTTGTTCC ACCATGCGCG CGGGCAGGCG TTCGCTATCG AAACCGCGAT CGTCAAGGCC GGCGCAGTGG TGTGGGAATC GCTGTCGACC TACCTGCGCG TGGGCGTGCC GTCGCCGCAG GGGGCACCGT TGATTGCGCT GCCAAGCGTG CAGAACTTGT CGCTCGACGG CCGCTGGGAT GTGCCTGCCG ACACCGGCCG GCGCTACGCC GGCGTGTCGG GGGACTGGAA CCCCATCCAC GTATCCAACA TCGGCGCGAA GCTGTTCGGC TTCGCGCACC CCATCGCCCA CGGCATGTGG ACGAAGGCCC GTGCGCTGGC CGCGCTGCTG CCGGCCGCGC CGCTCACGGA AGGCGAAGTG GTGGCCGAGT TCAAGACCCC GCTATCACTG CCCGGCGCGG CGACGCTGTG GCAAGCCAAC GAAGCCACGC CCGGCCGCGC GTTTGAGGTG CGCAACGCCA CGGGCGACAA GCCCTATCTG CGCGGCATGC TGACGCTGCC GCACGCACAA CAAGACAACA CGGGAGACTG A
|
Protein sequence | MRTLAQPFPM VATQTLVTEP PSPGALAWRA LLSQRKGRRG GPLPRHTLVR QEVPLEAEHI AQYAAVCGFS PAHGVPMTYP HLLGFSLQLM LMTESAFPYP VIGLVHLCNT IRQHQRLQAG ERVRVEVRPR RLFHHARGQA FAIETAIVKA GAVVWESLST YLRVGVPSPQ GAPLIALPSV QNLSLDGRWD VPADTGRRYA GVSGDWNPIH VSNIGAKLFG FAHPIAHGMW TKARALAALL PAAPLTEGEV VAEFKTPLSL PGAATLWQAN EATPGRAFEV RNATGDKPYL RGMLTLPHAQ QDNTGD
|
| |