Gene Rpic_0415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0415 
Symbol 
ID6289251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp443053 
End bp443973 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content69% 
IMG OID642623982 
ProductMaoC domain protein dehydratase 
Protein accessionYP_001898005 
Protein GI187927518 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00134356 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCACGC TGGCCCAGCC CTTTCCGATG GTCGCAACCC AGACGCTGGT AACCGAGCCG 
CCGTCGCCGG GGGCACTGGC CTGGCGCGCG CTGCTGTCGC AACGCAAAGG CAGGCGCGGC
GGGCCGCTGC CGCGCCACAC CCTGGTGCGC CAGGAGGTGC CGCTCGAGGC CGAACACATT
GCGCAGTACG CGGCGGTGTG TGGGTTCTCG CCCGCGCATG GCGTACCGAT GACGTATCCG
CATCTGCTGG GCTTTTCGCT GCAGCTCATG CTGATGACGG AATCGGCGTT TCCGTATCCG
GTGATCGGCC TCGTGCACCT GTGCAACACC ATCCGCCAGC ACCAGCGCCT GCAGGCGGGC
GAACGCGTGC GCGTGGAAGT GCGCCCGCGC CGGTTGTTCC ACCATGCGCG CGGGCAGGCG
TTCGCTATCG AAACCGCGAT CGTCAAGGCC GGCGCAGTGG TGTGGGAATC GCTGTCGACC
TACCTGCGCG TGGGCGTGCC GTCGCCGCAG GGGGCACCGT TGATTGCGCT GCCAAGCGTG
CAGAACTTGT CGCTCGACGG CCGCTGGGAT GTGCCTGCCG ACACCGGCCG GCGCTACGCC
GGCGTGTCGG GGGACTGGAA CCCCATCCAC GTATCCAACA TCGGCGCGAA GCTGTTCGGC
TTCGCGCACC CCATCGCCCA CGGCATGTGG ACGAAGGCCC GTGCGCTGGC CGCGCTGCTG
CCGGCCGCGC CGCTCACGGA AGGCGAAGTG GTGGCCGAGT TCAAGACCCC GCTATCACTG
CCCGGCGCGG CGACGCTGTG GCAAGCCAAC GAAGCCACGC CCGGCCGCGC GTTTGAGGTG
CGCAACGCCA CGGGCGACAA GCCCTATCTG CGCGGCATGC TGACGCTGCC GCACGCACAA
CAAGACAACA CGGGAGACTG A
 
Protein sequence
MRTLAQPFPM VATQTLVTEP PSPGALAWRA LLSQRKGRRG GPLPRHTLVR QEVPLEAEHI 
AQYAAVCGFS PAHGVPMTYP HLLGFSLQLM LMTESAFPYP VIGLVHLCNT IRQHQRLQAG
ERVRVEVRPR RLFHHARGQA FAIETAIVKA GAVVWESLST YLRVGVPSPQ GAPLIALPSV
QNLSLDGRWD VPADTGRRYA GVSGDWNPIH VSNIGAKLFG FAHPIAHGMW TKARALAALL
PAAPLTEGEV VAEFKTPLSL PGAATLWQAN EATPGRAFEV RNATGDKPYL RGMLTLPHAQ
QDNTGD