Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0411 |
Symbol | |
ID | 6289712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 437812 |
End bp | 438738 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642623978 |
Product | OmpW family protein |
Protein accession | YP_001898001 |
Protein GI | 187927514 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0130302 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGCA CCGCCCGCCG CCTTGCTGCA GCCATTGCCT GCGCCGCCGC CAGCACCCTT GCTGCCCCCC TGGCTCACGC CCAATCCACC GCAGAGGCCA ACGTGGCCGC AAGCGCCAGC AATGGCAGTG GCATGAGCAG CGGTGGCGGT GGCGGCTTCA GCGGCTTCAT GGACAACTAC GTCTGGGGCC GCAACGTCAT GGCGCTGGGC TGGTTCTACA TCCGCCCGAT GGATTCGGCC ACGCCGCTGA CCACCACCAC CAGCGCGCTG GGCCTGGGCA CCTACCAGTC GCCAGGAACT GACGTGAAAG TCAGTAACGC CAATACGCTG TCGCTCACGT TCACGCACTT CTTTAACGAC AACATCGCCG GTACGTTCGT GGGTGGCGTT CCGCCCAAGT TCAACCTGTA CGGCAGCGGC AATGTGATCG CGCCGGTGCC GGTGGTCGGG CCGCTGACGC TAGTCAACCT GGGCCTGCCG CAAAACAACC CGGTCGCCAC CGTGCGTGAA TGGAGCCCGG CGATCGTCGC GCAGTACTAC TTCGGCACCA AGGAAAGCAA GCTGCGCCCG TTCGTCGGCG CAGGCGTCAG CTACAACTTC TTCACCAACC TGAAACTGAA CCAGAACTTC GTCAACGGCC TGCAGAACCT GGGGCAGGTG CTGCAGCTGG GCATGGGCCA GGTTCCGACT GGCCCGGCCA AGGTGACGGC GGAAACGTCC AGCTCGTGGA CGCCGGTGGC CAACGTAGGC GTCTCGTATG AGTTCGCCAA GAACTGGACC GCCATCGGCA CGGTGTCTTA CCTGCCGCTG AAGACGACCT CCACCATCAC GATCCGCAGC CAGCAAGGCC AGGTGCTGGC GGTCAACAAG ACCGACATCA AGGTCGACCC GATCGTGTTC GGCTTGGCTG TGGGCTACAA GTTCTAA
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Protein sequence | MNRTARRLAA AIACAAASTL AAPLAHAQST AEANVAASAS NGSGMSSGGG GGFSGFMDNY VWGRNVMALG WFYIRPMDSA TPLTTTTSAL GLGTYQSPGT DVKVSNANTL SLTFTHFFND NIAGTFVGGV PPKFNLYGSG NVIAPVPVVG PLTLVNLGLP QNNPVATVRE WSPAIVAQYY FGTKESKLRP FVGAGVSYNF FTNLKLNQNF VNGLQNLGQV LQLGMGQVPT GPAKVTAETS SSWTPVANVG VSYEFAKNWT AIGTVSYLPL KTTSTITIRS QQGQVLAVNK TDIKVDPIVF GLAVGYKF
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