Gene Rpic_0410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0410 
Symbol 
ID6289711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp436670 
End bp437668 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content71% 
IMG OID642623977 
Productputative transmembrane protein 
Protein accessionYP_001898000 
Protein GI187927513 
COG category[R] General function prediction only 
COG ID[COG3380] Predicted NAD/FAD-dependent oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0126834 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGC CTTCCATCGC CATCGTCGGA GCCGGCATTG CCGGTGTTGC CTGTGCCAAC 
GCGCTTGCCG CAGAAGGCAT TGCCACCACG GTCTATGAGC GCGCTGGCGG TGTCGGGGGC
CGGCTGGCCA CCACGGTGCT GCCCGAGTCC GCCCCGGCGT ATGCGTTCGA CCATGGTGCG
CAGTCGTTCA ACGTGCGCAG CGAGGTCTTC CGGCGCGCGG TGGATGCCGC TGGCCGTCAG
GGCTCGGTGC TGCCGTGGCC CGCGCGCTGG GGCCATCGCA CGATCGACGC CCTGCAAGCC
GACTCGCGCG ACGAAGCCCG CTACGTCGGC CTGCCCGGCA TGGGCGCGCT GGTGCGCAGC
CTGGCCGCGC CGCTGGATGT GCGCTTCGGC CACGCCGTCA CGCGTGTGGC GCACGATGGC
CGGCGCTGGA CGATCGAGCG CAATGGCACC GACGCCGCCC ACGCCGACTT CCTCGCCCTG
GCCCTGCCCG CGCCCGAACT GTCCGCACTG TTTCACGGCG CCACGCCAGC CTCGCTGCAG
GAAGCCATCG CGCCGGTGCA CTACGCCCCG TGCTGGGCGC TGATGATGGG CTTTGCGCAA
CCGCTCGGCT TGCCGTATGA CGGCATCCGC ATCGACGACG ACGTGCTCGC CTGGGCCGCC
CGCGACAACA GCAAGCCGGG CCGCGTCATG GTCGATGAAT CCTGGGTGGT GCATGCGTCG
CCGGGCTGGT CGGCCGCACA TGCCCAGGAC ACCCCCGAGC AGGCGGTGCA CGCCATGCAC
GCCCGCTTTG CCGAAGCCTT CCCGGGCACG CCTCAGCCCG ATGTGATGGC CGCGCACTTG
TGGCCGCACG CGCTGGTCGA GCAGTCCGCT GGTGTGCCCT GCCACTGGGA CGCCGCCGCC
CGCCTGGGTG CCTGCGGTGA CTGGTGCGAA GGCCCGCGCG TGGAAGCCGC GTTCCTGAGC
GGTATTGCGC TGGCCGCCAA GATTGCCGAA GCGCTATAA
 
Protein sequence
MSQPSIAIVG AGIAGVACAN ALAAEGIATT VYERAGGVGG RLATTVLPES APAYAFDHGA 
QSFNVRSEVF RRAVDAAGRQ GSVLPWPARW GHRTIDALQA DSRDEARYVG LPGMGALVRS
LAAPLDVRFG HAVTRVAHDG RRWTIERNGT DAAHADFLAL ALPAPELSAL FHGATPASLQ
EAIAPVHYAP CWALMMGFAQ PLGLPYDGIR IDDDVLAWAA RDNSKPGRVM VDESWVVHAS
PGWSAAHAQD TPEQAVHAMH ARFAEAFPGT PQPDVMAAHL WPHALVEQSA GVPCHWDAAA
RLGACGDWCE GPRVEAAFLS GIALAAKIAE AL