| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0344 |
|---|
| Symbol | |
|---|
| ID | 6287979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 365010 |
|---|
| End bp | 365756 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642623911 |
|---|
| Product | Endonuclease/exonuclease/phosphatase |
|---|
| Protein accession | YP_001897934 |
|---|
| Protein GI | 187927447 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3568] Metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCGTT TGCGCGTTGC CACCTACAAC ATCCACAAGG GCGTGACAGG CATTGCGCGG
CGCGTGCGCG TGCATGACGT GCGGCAGGGC CTGCATAGCA TGGACGCCGA TATCGTCTTC
CTGCAGGAAG TGCAGGACCG CAACGACCGC CTGGTCGCCG CAGAACTGTT CGACCCGAAT
TACACGCAGC TGCGCTACCT TGCGACGGAC GTCTATCCGC ACACCGTCTA TGGCCGCAAT
GCCGTCTACG AGCACGGGCA TCACGGCAAC GCCATTCTGT CGCGGTTTCC GATCCTGCTG
TCGGAAAACT TGGATATCTC CGACCACCGT TTCGAGCAGC GCGGACTGCT GCACGCCGTG
ACCGATCTCG GCTTCGGCGA AGTGCACCTG CTGTGTGCAC ACTTCGGCCT GTTCGCCCGC
AGCCGGCAGC GGCAGGCGGA GGCGCTCGTC GATCGCGTGC GTTCGGTCGT GCCACCCGAT
GCGCCGCTCG TGGTGGCGGG CGATTTCAAC GATTGGAACA ACCGGCTCGA TCGCACGATT
TGCCAAGCGC TGGGGGCGAC CGAAGTGGCC GACAAGGCCG CCAACGCGCG CCCGGTGCGC
ACCTTCCCGA GCCACATGCC GTGGTTGCGT CTAGACCGCA TCTACGTACG CGGTTTCGAT
ATTGAACGTG CGCATGCGCT GACCGGCCGC GAATGGGCGC AGCGCTCCGA TCACGTTCCC
CTGCTAGCTG AACTGGCGCA TCCATGA
|
|---|
| Protein sequence | MLRLRVATYN IHKGVTGIAR RVRVHDVRQG LHSMDADIVF LQEVQDRNDR LVAAELFDPN
YTQLRYLATD VYPHTVYGRN AVYEHGHHGN AILSRFPILL SENLDISDHR FEQRGLLHAV
TDLGFGEVHL LCAHFGLFAR SRQRQAEALV DRVRSVVPPD APLVVAGDFN DWNNRLDRTI
CQALGATEVA DKAANARPVR TFPSHMPWLR LDRIYVRGFD IERAHALTGR EWAQRSDHVP
LLAELAHP
|
|---|
| |