| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0325 |
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| Symbol | |
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| ID | 6287893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 341853 |
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| End bp | 343373 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642623892 |
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| Product | threonine dehydratase |
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| Protein accession | YP_001897915 |
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| Protein GI | 187927428 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.370445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATCG ATTACCTCAA GAAAATCCTG ACTGCGAAGG TCTATGACGT CGCGGTGGAA
ACCGAGCTGA AGTTCGCGCC CAACCTGTCA GTGCGCACCG GCAACCGCGT CTACCTCAAG
CGCGAGGATG ACCAGCCGGT GTTCTCGTTC AAGCTGCGCG GCGCCTACAA CAAGATGGCC
TCGCTCACGC CGGCCGAGCG CAAGCGCGGG GTAATTACGG CATCGGCGGG CAACCACGCG
CAGGGCGTGG CGTTCAGCGC GGCGCGCATG GAATGCAAGG CGGTAATCTG CATGCCAGTG
ACGACGCCGC AGTTGAAGAT TGACGGCGTG CGCTCGCGCG GCGGCGATTG GGTCGACGTT
GTGCTGCACG GTGAAAGCTA TTCCGACGCC TACAACCACG CCGCCAAGCT GCAGGAAAAA
CATGGCTACA CCTTCGTTCA CCCGTTCGAC GATCCGGAAG TGATTGCCGG CCAGGGCACG
ATCGCCATGG AAATCCTGCG CCAACATCCG CAGCCGATCC ATGCGATCTT TTGCTCGATC
GGTGGCGGCG GGCTGATCTC GGGCATTGCG GCCTACGTGA AGGCCGTGCG ACCGGACGTC
AAGGTCATCG GCGTGCAGAG CGTGGATTCC GACGCGATGG CGCGCTCGGT GGCCGCCGGC
AAGCGCGTCG AACTGAAGGA GGTGGGCCTG TTTGCGGACG GCACGGCGGT CAAGCTGGTG
GGCAAGGAGA CTTTCCGCCT CACGCGCGAA CTCGTCGACG AGATCATCAC CGTGGATACG
GATGCCATCT GCGCGGCGCT CAAGGACGTG TTCCAGGACA CGCGCAGCCT GCTGGAGCCG
TCGGGCGCGC TGGCGCTGGC CGGCCTCAAG CAGTATGCCG AGACGCACAA GCTGAAGAAC
GAATCGCTCG TGGCCGTGGC GAGCGGGGCG AACATGAACT TCGACCGCCT GCGCTTCGTG
GCCGAGCGCG CCGAAGTGGG CGAGGCCCGC GAAGCCGTGT TTGCCGTGAC GATTCCGGAA
GAGCGCGGCA GCTTCAAGCG CTTCTGCGAA CTGGTCGGCT GGTCGCGCAA CGTGACGGAG
TTCAACTACC GCATTGCCAG CAAGGACGCC GCGCATATCT TCGTGGGCGT GCAAATTGCG
TCGCGCGCAG AGGGCGACAA GATTGCCGAG AACTTCCGCA AGCACGGCTT CCCGACACTG
GACCTGTCGA ACGACGAACT GGCCAAGCAG CACATCCGCT ACATGGTGGG TGGGCGTTCG
CCGCTGGCAG AGAACGAGCA TCTCTACCGC TTCGAGTTTC CTGAGCGGCC AGGCGCGCTG
ATGAAGTTCC TCTCGAGCAT GAGCCCGAAC TGGAACATCA GCCTGTTCCA CTACCGTAAC
CAAGGCGCGG ATTCGAGCAA CATCCTCGTC GGCATCCAGG TACCGAAGAA CGAGAAGCGC
GAGTTCAAGG CGTTCCTCGC CACGCTGGGC TATACCTATT GGGACGAAAG CGAGAACCCC
GTCTACAGCC TGTTTTTGTG A
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| Protein sequence | MAIDYLKKIL TAKVYDVAVE TELKFAPNLS VRTGNRVYLK REDDQPVFSF KLRGAYNKMA
SLTPAERKRG VITASAGNHA QGVAFSAARM ECKAVICMPV TTPQLKIDGV RSRGGDWVDV
VLHGESYSDA YNHAAKLQEK HGYTFVHPFD DPEVIAGQGT IAMEILRQHP QPIHAIFCSI
GGGGLISGIA AYVKAVRPDV KVIGVQSVDS DAMARSVAAG KRVELKEVGL FADGTAVKLV
GKETFRLTRE LVDEIITVDT DAICAALKDV FQDTRSLLEP SGALALAGLK QYAETHKLKN
ESLVAVASGA NMNFDRLRFV AERAEVGEAR EAVFAVTIPE ERGSFKRFCE LVGWSRNVTE
FNYRIASKDA AHIFVGVQIA SRAEGDKIAE NFRKHGFPTL DLSNDELAKQ HIRYMVGGRS
PLAENEHLYR FEFPERPGAL MKFLSSMSPN WNISLFHYRN QGADSSNILV GIQVPKNEKR
EFKAFLATLG YTYWDESENP VYSLFL
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