Gene Rpic_0280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0280 
Symbol 
ID6287440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp295113 
End bp295919 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content60% 
IMG OID642623850 
Producttransposase IS4 family protein 
Protein accessionYP_001897873 
Protein GI187927386 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAAAC GCAGACCGTA TCCGAGCGAC GTGAGTGACG AAGAATGGAG CTTCGCGGCG 
CCGTATTTGA CGTTGATGAA CCAAGACGCG CCGCAGAGGC GATATGAATT GCGAGAGCTG
TTCAACGCGC TGCGTTGGCT GGCACGCGCG GGGGCCGCAT GGCGCATGCT GCCGACGAAC
TTTCCGCCCT GGGAGGCTGT GTACCAGCAG ACGCAACGCT GGCTGCGAGG GGGCTGTTTT
GAGGCCATGG TTCAGGATTT GCGTTCGGTG CTGCGCGTGG CGCAAGGGCG GCAAGGTCAG
CCGAGTGCAG TCATTCTCGA CGGGCGTACG CTGCAATCGA CGTGCGAGAG CGGTCCGCGC
GCGGGTTACG ACGGCTACAA GCGCAAACGG GGAAGCAAGG TGCATATGGC CGTCGATACA
CTCGGGCATT TGCTGGCAGT TCATATCACG CCGGCCAATG AACAAGAGCG CGCGCAAGTT
CAGGTGTTGG CACGAGAGGT TCAGCTTGTG ACCGGGCAGA CTGTAAAGCT TGCTTTTGCC
GACCAGGGTT ATACGGGCGA AGAACCAGCG CAAGCCGCGC GGGACGAAGG CATCGAATTG
CAGGTCATCA AACTGCCAGA GGCGAAGAAA GGCTTTGTCC TGCTGCCACG CCGATGGGTC
GTCGAGCGCA GTTTCGGATG GCTCAATCGG TTTCGAAGAC TCGCACGCGA CTACGAGCGC
TTGCCTGAAA CACTCGCCGG CTTGCATTTC GTCGTCTTTG CCATGCTCAT GCTCGTTCAC
GCCGCACCTG TCGTCCAAAG TGCATAA
 
Protein sequence
MEKRRPYPSD VSDEEWSFAA PYLTLMNQDA PQRRYELREL FNALRWLARA GAAWRMLPTN 
FPPWEAVYQQ TQRWLRGGCF EAMVQDLRSV LRVAQGRQGQ PSAVILDGRT LQSTCESGPR
AGYDGYKRKR GSKVHMAVDT LGHLLAVHIT PANEQERAQV QVLAREVQLV TGQTVKLAFA
DQGYTGEEPA QAARDEGIEL QVIKLPEAKK GFVLLPRRWV VERSFGWLNR FRRLARDYER
LPETLAGLHF VVFAMLMLVH AAPVVQSA