Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0251 |
Symbol | ipk |
ID | 6289087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 265262 |
End bp | 266131 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642623822 |
Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
Protein accession | YP_001897845 |
Protein GI | 187927358 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.378112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTCCG CCCCCGTCGA GCTGCGTGAT TGCCCCGCGC CTGCCAAGCT CAATCTCTTC CTGCATGTAG TCGGCCGCCG GCCCGATGGC TACCACCTGC TGCAAACCGT CTTCCAGTTG ATCGACTGGA GCGACACGCT GCATTTCGCG CGCCGCCCCG ACCGCCGCCT CGTGCGCACC ACCGACATCC TCGGCGTGCC CGCCGATGAC GACCTTGTGA TCCGCGCCGC GCGCCTGCTG CAAGCGGAAA CCGGCTGCAC CTACGGCGTC GACATCGCCA TCGAGAAACG CCTGCCGATG GGCGGAGGCC TTGGTGGTGG CTCGTCTGAT GCCGCCACCA CGCTGCTCGC GCTCAATCGC CTTTGGGGCC TTGATCTGCC GCGCGCGCAA CTGATGAAGA TCGGCCTCAA GCTCGGCGCC GACGTGCCCT TCTTTGTATT CGGCCAGAAC GCCTTCGCCG AGGGGATCGG CGAAAAACTC ACGCCCATCA CGCTGCCGCC GGCTGCGTTC GTGGTGATTC ACCCACGCGT GCATGTGCCC ACCCCTGCAA TTTTTTCAGA TGAAGGGTTG ACACGCGATA CGCCACTCAC CATAATTACG GACTTTCCTG ACCAACAAAT TGTTTTCGCT TACGGTCGCA ACGATCTACA AGCGGTGGCG GAAAGGAAAT ACGGCGAAAT CGCCCGAGCA CTTGTCTGGC TGCGTCAGTT CAGCCCTCTG GCAAGAATGA CCGGATCCGG CGCCTGCGTA TTTGCTCCGT TCGACAACGT TGAGCATGCG CAAGCGGTGG CGGATCAGGT GCCTTCCGAA TGGGAAGGTC GGTGTGCGGC AGGTCTGACG CATCACCCGC TCGCAAGATT TGCTGTGTAA
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Protein sequence | MSSAPVELRD CPAPAKLNLF LHVVGRRPDG YHLLQTVFQL IDWSDTLHFA RRPDRRLVRT TDILGVPADD DLVIRAARLL QAETGCTYGV DIAIEKRLPM GGGLGGGSSD AATTLLALNR LWGLDLPRAQ LMKIGLKLGA DVPFFVFGQN AFAEGIGEKL TPITLPPAAF VVIHPRVHVP TPAIFSDEGL TRDTPLTIIT DFPDQQIVFA YGRNDLQAVA ERKYGEIARA LVWLRQFSPL ARMTGSGACV FAPFDNVEHA QAVADQVPSE WEGRCAAGLT HHPLARFAV
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