Gene Rpic_0240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0240 
Symbol 
ID6288317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp255236 
End bp255886 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content62% 
IMG OID642623810 
Productmaleylacetoacetate isomerase 
Protein accessionYP_001897834 
Protein GI187927347 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID[TIGR01262] maleylacetoacetate isomerase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATCA AGCTGTACAA CTATTTCCGC AGTTCGGCGT CATTCCGCGT GCGTATTGCC 
CTGGAGGTCA AGGGCCTGCC GTACGACTAC GCGCCGGTCC ACCTGCTCAA GGGCGAGCAA
CTGGCCCCCG ACTTCGTCAA GCTGAACCCC GATGCGCTGG TGCCCGTGCT GTGCGATGGC
AACGACGTGC TGAACCAGTC TTTGGCCATC GTCGAGTATC TGGAAGAGAC GCATCCCGAG
CCCACGCTGC TGCCGGGTTC GGCGAGTAAT CGCGCGCATA TCCGCGCGAT CGCGCTGGCC
ATTGCATGCG AGATCCATCC GCTCAACAAC CCACGCGTGC TGAAGTATCT GAAGCACACG
TTCAACGTGG AAGAAGAAGC GCGCAACGAG TGGTATCGCC ACTGGGTGAA GCTGGGGTTT
GCGGCGCTGG AAACGCGGCT GTCACAGTCG CCGCTGACCG GTGCCTACTG TGTTGGCGAC
ACGCCAACGC TGGCCGACGT GTGCCTCGTG CCGCAGGTGT TCAACGGCAA GCGGTTCGAT
GTGGCGGTGG AAGATTACCC GACGCTTGCG CGCATCTTTG CGCACTGTAT GGCGCAGGAG
GCGTTTCAGC GGGCTGCGCC TGCGGCGCAG CCGGATGCGG TTTCCGCGTA A
 
Protein sequence
MSIKLYNYFR SSASFRVRIA LEVKGLPYDY APVHLLKGEQ LAPDFVKLNP DALVPVLCDG 
NDVLNQSLAI VEYLEETHPE PTLLPGSASN RAHIRAIALA IACEIHPLNN PRVLKYLKHT
FNVEEEARNE WYRHWVKLGF AALETRLSQS PLTGAYCVGD TPTLADVCLV PQVFNGKRFD
VAVEDYPTLA RIFAHCMAQE AFQRAAPAAQ PDAVSA