Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0193 |
Symbol | |
ID | 6287994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 211603 |
End bp | 212244 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642623764 |
Product | Lysine exporter protein (LYSE/YGGA) |
Protein accession | YP_001897788 |
Protein GI | 187927301 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.456922 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.996717 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTTGC AAGTCTGGCT GGCCTTCTTT TTGGCTGCCT GGGTGATCGC CATCTCGCCC GGGTCGGGCG CCATCCTGTG CATGAGCCAC GGCCTGACGC ATGGCGTGCG CCGCACGTCG GTCACGATTG CCGGGCTGGA GCTGGGCATT GTCGTGATCC TGTTCATAGC GGGTGCCGGG CTGGGCGCGC TGCTGATCGC GTCGGAGCAC GCCTTTACGG CCATCAAGAT CATTGGTGCG ATGTACCTGA TCTACCTGGG TATCGTCCAA TGGCGCACGC CCATCCAGAT CGCCAAGCCC ACTGAGGGCG AGCCCCTGAA GGTCTCGGGC AGCGGTGCGC GCCGTCGGTT CCTGGTTGGA TTGCTGACCA ATCTGACGAA CCCGAAGGGC ATCCTGTTCA TGGTGGCCGT GCTGCCGCAG TTCATCGATC CGGCCAAGCC GCTGCTTTCG CAACTCGGCA TCCTGGCGGC GACGATGGTG TTCGTCGACC TGATCGTCAT GCACGGCTAT GCGCTGCTGG CCTCGCGCGC GCAGCGCCTG TTCCGCAATC CGCGCGCACT GCGTTGGCAG AGCCGCTTCT TTGGCGGCAT GCTGATGAGC ATCGGCGCAG CGCTGTTCTT CGTGAAGCGC CAGACTGCGT GA
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Protein sequence | MTLQVWLAFF LAAWVIAISP GSGAILCMSH GLTHGVRRTS VTIAGLELGI VVILFIAGAG LGALLIASEH AFTAIKIIGA MYLIYLGIVQ WRTPIQIAKP TEGEPLKVSG SGARRRFLVG LLTNLTNPKG ILFMVAVLPQ FIDPAKPLLS QLGILAATMV FVDLIVMHGY ALLASRAQRL FRNPRALRWQ SRFFGGMLMS IGAALFFVKR QTA
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