Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0168 |
Symbol | |
ID | 6287278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 185574 |
End bp | 186698 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642623739 |
Product | protein of unknown function DUF140 |
Protein accession | YP_001897763 |
Protein GI | 187927276 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.710497 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATCACCT TCCGTACACC GCAGCTTGAG GTGCGCGTTG TCGATGGACG CTCCGTCGCC TTTCTCTCTG GCGACTGGAC CACGCTTGCC CTGGCCGAAC GCGCCGGCGT GCGCAGCGCC CGCCAGCAGA TCCGCGCCGG GCTGGACAAC GCCAACGCGT GGTGCCTGAC CGAAGTCGGC CGTATCGACC ACTTTGGCGC GCAACTGCTC TGGCGTGCCT GGGGCAATCA GTGGCCCGAA CATCTGGATG CCCGGCCCGA CCAGCGCCGC ATGCTCGATC GTGTTGCCAA GCTCGACCCC GGCGGCTGGA AGCAGCGCCT GGCGCCCCGC ATGAACCCCG TGGCGATCCT CGGCGAGGGC ATGCTCGATT TTTTCGATCA CGCGGGCAAT GGCATCGCCA TGGTCGGCCA GCTCGTGTTC GACCTGGGCA GGTTCGTGCG CGCGCCGCAT CGCGGGCCGT GGCGCGAGAT CTCCGCCAAC ATCTACAGCA CGGGCTACAA GGCGCTGGGC ATCACCGCGC TGGTGGGCTT CCTGATCGGC ATCGTGCTCA GCTACCTGTC GGCCAACCAG TTGCGCGTAT TCGGGGCCAG CATCTTCATC GTCAACATTT TGGGGATGGC CATCATCCGC GAGCTCGGGC CGGTGCTGGC GGCGATTCTG GTGGCTGGGC GTTCGGGTTC AGCCATCACT GCGCAGATCG GCGTGATGCG CGTGACCGAA GAGCTGGATG CGATGCGCGT GATGGGCATC TCGCACGGTT TCCGCCTGAT CCTGCCCAAG GTGATTGCGC TGGCGATTGC CATGCCGCTG CTGGTGGCGT GGACGGATCT ACTCGCGCTG GCGGGCGGTA TTCTCGCGGC CAAGTTCCAG CTCGACATCA GCCCGACGTA TTTCATCACC TCGTTGCCCG ATGCTGTGCC GGTGGCCAAC CTGTGGCTCG GCATTGGCAA GGGCGTGGTG TTTGGCATGC TGATCGCGCT GGTGGCCTGC CACTTCGGCC TGCGCATCCA GCCCAACACG CAGAGCCTGG GCGAGGGCAC GACGACGTCC GTCGTGGTGT CGATCACCAT CGTCATCCTG GCAGACGCGG TGTTTGCCAT CCTCTTCAAG GACGTCGGGA TATGA
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Protein sequence | MITFRTPQLE VRVVDGRSVA FLSGDWTTLA LAERAGVRSA RQQIRAGLDN ANAWCLTEVG RIDHFGAQLL WRAWGNQWPE HLDARPDQRR MLDRVAKLDP GGWKQRLAPR MNPVAILGEG MLDFFDHAGN GIAMVGQLVF DLGRFVRAPH RGPWREISAN IYSTGYKALG ITALVGFLIG IVLSYLSANQ LRVFGASIFI VNILGMAIIR ELGPVLAAIL VAGRSGSAIT AQIGVMRVTE ELDAMRVMGI SHGFRLILPK VIALAIAMPL LVAWTDLLAL AGGILAAKFQ LDISPTYFIT SLPDAVPVAN LWLGIGKGVV FGMLIALVAC HFGLRIQPNT QSLGEGTTTS VVVSITIVIL ADAVFAILFK DVGI
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