| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0122 |
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| Symbol | |
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| ID | 6287788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 142031 |
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| End bp | 142720 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642623693 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_001897717 |
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| Protein GI | 187927230 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCAG TGACCTCCTC TGTTTCGAAC CACCCGCGCT TTGACGCGAT CCTCTTCGAT
TGCGACGGCG TGCTGGTCGA CAGCGAACCC ATCGTCAACC GTTTGATCTG GGAGATGCTG
ATCGAGCTTG GCATCGACAT CAGCCTGGAA GATTCCATCC AGCGTTTCCT CGGCAAGGCC
ATCCGCGAAG AGCTGGATGC GATTGCCGAG ATGCGCGGCG CACCGCTGCC GCCGAACTGG
TTGTCCACCT TCCAGGCGCG ACGCAACGTG CTGCTCGAAG CCGAAGTGGA AGCCGTGCCG
CATATCGGGC ACGCCATCGA TGTGCTCTCC AGGCTCGGCC TGCCGATGGC CGTGGCTTCC
GGAGCGGACC GCATGAAGGT GGAGCTGCAA CTCAACCGCA CCGGTCTGAT CGAGCATTTC
CAGCCGACGG ACGTACGCAT CTTTTCGGCC ACCGAAGTCG CGCGCAGCAA GCCCGCGCCC
GACGTGTATC TGCTCGCCGC CAGCAGCCTC GGGGTATCGC CCTCGCGCTG CCTGGTGATC
GAAGACAGCC CCACGGGCGT TACCGCCGGG CACGCAGCCG GCATGACGGT GCTGGCGTAC
GCGGGCCGCA ATGCACCAGG CCCGCTGATT GCCGCCGGCG CCACACGCAC GTTCACCGAT
ATGCGCGAAC TGCCGGAGTT GCTGGCCTGA
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| Protein sequence | MTAVTSSVSN HPRFDAILFD CDGVLVDSEP IVNRLIWEML IELGIDISLE DSIQRFLGKA
IREELDAIAE MRGAPLPPNW LSTFQARRNV LLEAEVEAVP HIGHAIDVLS RLGLPMAVAS
GADRMKVELQ LNRTGLIEHF QPTDVRIFSA TEVARSKPAP DVYLLAASSL GVSPSRCLVI
EDSPTGVTAG HAAGMTVLAY AGRNAPGPLI AAGATRTFTD MRELPELLA
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