Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0122 |
Symbol | |
ID | 6287788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 142031 |
End bp | 142720 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642623693 |
Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
Protein accession | YP_001897717 |
Protein GI | 187927230 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCAG TGACCTCCTC TGTTTCGAAC CACCCGCGCT TTGACGCGAT CCTCTTCGAT TGCGACGGCG TGCTGGTCGA CAGCGAACCC ATCGTCAACC GTTTGATCTG GGAGATGCTG ATCGAGCTTG GCATCGACAT CAGCCTGGAA GATTCCATCC AGCGTTTCCT CGGCAAGGCC ATCCGCGAAG AGCTGGATGC GATTGCCGAG ATGCGCGGCG CACCGCTGCC GCCGAACTGG TTGTCCACCT TCCAGGCGCG ACGCAACGTG CTGCTCGAAG CCGAAGTGGA AGCCGTGCCG CATATCGGGC ACGCCATCGA TGTGCTCTCC AGGCTCGGCC TGCCGATGGC CGTGGCTTCC GGAGCGGACC GCATGAAGGT GGAGCTGCAA CTCAACCGCA CCGGTCTGAT CGAGCATTTC CAGCCGACGG ACGTACGCAT CTTTTCGGCC ACCGAAGTCG CGCGCAGCAA GCCCGCGCCC GACGTGTATC TGCTCGCCGC CAGCAGCCTC GGGGTATCGC CCTCGCGCTG CCTGGTGATC GAAGACAGCC CCACGGGCGT TACCGCCGGG CACGCAGCCG GCATGACGGT GCTGGCGTAC GCGGGCCGCA ATGCACCAGG CCCGCTGATT GCCGCCGGCG CCACACGCAC GTTCACCGAT ATGCGCGAAC TGCCGGAGTT GCTGGCCTGA
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Protein sequence | MTAVTSSVSN HPRFDAILFD CDGVLVDSEP IVNRLIWEML IELGIDISLE DSIQRFLGKA IREELDAIAE MRGAPLPPNW LSTFQARRNV LLEAEVEAVP HIGHAIDVLS RLGLPMAVAS GADRMKVELQ LNRTGLIEHF QPTDVRIFSA TEVARSKPAP DVYLLAASSL GVSPSRCLVI EDSPTGVTAG HAAGMTVLAY AGRNAPGPLI AAGATRTFTD MRELPELLA
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