Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0114 |
Symbol | |
ID | 6288013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 132426 |
End bp | 133355 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642623685 |
Product | hydroxymethylglutaryl-CoA lyase |
Protein accession | YP_001897709 |
Protein GI | 187927222 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATTC CGAATTTTGT GAAGGTGGTC GAGGTCGGCC CGCGCGATGG TCTGCAGAAC GAGAAGTCGC CAGTTTCGAC GGACACCAAG GTCGAGCTGG TGAACCGCCT GTCCGAGGCC GGCTTCGTCA ACGTGGAAGC CGCCTCGTTC GTGTCGCCCA AATGGGTGCC GGCGATGGCC GATGGCGCCG ACGTGATGGC GCGCATCCAG CGCCGGCCGG GCACGCTGTA CTCCGTGCTC ACGCCCAACA TGAAAGGTTT CGAAGGCGCT GCTGCAGCAG GTGCGGACGA GATCGTGATC TTCAGCGCCG CCAGCGAGGC CTTTGCGCAG AAGAACATCA ACTGCACGAT CGCCGAGTCG ATCGAACGCT TTGTGCCGGT GGCCAAGGCC GCCAAGGATG CGGGCATTCG CGTGCGCGGG TCGATCTCGT GTTCGCTGGG CTGCCCGTAT CAGGGCGAAG TGCCGGTGTC GTCGGTGGTG GACGTCATCA AGCGTATGGC CGACCTCGGC TGCGACGAGA TCGACATTGC CGACACCATC GGCGTGGGCA CCGCGGGGCG GGTGAAAACC GTGATGGAAG CCGCTGCAGC GACGTTCCCG ATCGACCGCC TCTCGGGACA CTTCCACGAC ACATACGGCC AGGCGCTGGC CAACATCCTC GCCAGCCTGG AAGTCGGCAT CGCCATCTTC CACGCCTCAG TTGCGGGGCT GGGCGGCTGC CCGTATGCCA AGGGTGCGAC CGGAAACGTC GCCACCGAAG ATGTGCTGTA CCTGCTGCAC GGCCTGGGCA TCCGCACCGG CATCGACCTG GACAAGGTGG TGCTGGCGGG CGACTTCATC TCGCAAGCCA TCGGCCGCCC GACTGCCTCG CGTGCGGGTC GCGCGCTGCT GCTCAAGCTG CAGGACCAGA TCGCCCAGGC CTGCATCTGA
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Protein sequence | MSIPNFVKVV EVGPRDGLQN EKSPVSTDTK VELVNRLSEA GFVNVEAASF VSPKWVPAMA DGADVMARIQ RRPGTLYSVL TPNMKGFEGA AAAGADEIVI FSAASEAFAQ KNINCTIAES IERFVPVAKA AKDAGIRVRG SISCSLGCPY QGEVPVSSVV DVIKRMADLG CDEIDIADTI GVGTAGRVKT VMEAAAATFP IDRLSGHFHD TYGQALANIL ASLEVGIAIF HASVAGLGGC PYAKGATGNV ATEDVLYLLH GLGIRTGIDL DKVVLAGDFI SQAIGRPTAS RAGRALLLKL QDQIAQACI
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