| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0055 |
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| Symbol | |
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| ID | 6289192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 67303 |
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| End bp | 68277 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642623628 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001897652 |
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| Protein GI | 187927165 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.873688 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCAAG CGTTGTGCAT GGGTAGGGCA GGGTGTTTGG CGGCGGCATT GGCCGCAGCA
ATCGTGCTGG CGGGCTGCGC TAAACACGAC GACCGCACCT ACCAGGGCTA CGTGGAAGGT
GAGTTTGTCT ACGTGGCGTC GCCGGTGGGC GGGCGGCTGG ACTATCTCGG CGTGCAGCGC
GGGCAGACGG TCAACGCAGG TGCGCCGCTC TTCGTGCTGG AATCGGTGGA TGAGACTGCC
GCTCGCCAGC AGGCTGCCGC GCAATTGCAA GGCGCCGAAG CGCAACTCGC CGACCTGAAC
GTCGGCAAGC GTGTGCCGGA AGTGGACGCG GTGCGCGCGC AACTGGCGCA GGCGGTGGCG
GCGGACAAGC TCTCGTCGAC GCAGCTGGCG CGAGACGAGG CGCAGTTCCG TGCAGGCGGC
ATCGCGCAAT CGCAGCTCGA TGCAAGCCGC TCCAGCGCGC AGACCAACGC GCAGCGCGTG
CGTGAACTGA CCAACCAGCT GCGCATTGCC CAGTTGCCGG CGCGCAATGA CCAGATTCGC
GCGCAATCCG CACAGGTGGA GGCGGCGCGG GCCGCAGTGG CGCAGGCCCA ATGGCGGCTC
GACCAGAAAG CGCAGAAAGC TACGCAGGGC GGCCTCGTGT TCGACACGCT GTATCGCGAA
GGCGAATGGG TCGGCGCCGG CAGCCCCGTG GTGCGCATGC TGCCGCCGGC CAACGTCAAG
GTGCGATTCT TCGTGCCACA AGGCGTGGTC GGCGCGCTCA AGCCGGGGCA AGCCGCGCGC
CTGCACTGCG ATGGCTGCGC GGCTGATATC AACGCCACCG TCACGTACAT CGCAACAGAA
GCCGAATACA CGCCGCCCGT CATCTACAGC AACACGACGC GGGACAAGCT TGTCTTCATG
GTGGAAGCGC GGCCGGCCGC GGCCGATGGC CCGAAGCTGC GCCCGGGCCA ACCCGTCGAG
GTGACACTGC CATGA
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| Protein sequence | MRQALCMGRA GCLAAALAAA IVLAGCAKHD DRTYQGYVEG EFVYVASPVG GRLDYLGVQR
GQTVNAGAPL FVLESVDETA ARQQAAAQLQ GAEAQLADLN VGKRVPEVDA VRAQLAQAVA
ADKLSSTQLA RDEAQFRAGG IAQSQLDASR SSAQTNAQRV RELTNQLRIA QLPARNDQIR
AQSAQVEAAR AAVAQAQWRL DQKAQKATQG GLVFDTLYRE GEWVGAGSPV VRMLPPANVK
VRFFVPQGVV GALKPGQAAR LHCDGCAADI NATVTYIATE AEYTPPVIYS NTTRDKLVFM
VEARPAAADG PKLRPGQPVE VTLP
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