| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0045 |
|---|
| Symbol | |
|---|
| ID | 6287297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 56994 |
|---|
| End bp | 57794 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642623618 |
|---|
| Product | protein of unknown function DUF218 |
|---|
| Protein accession | YP_001897642 |
|---|
| Protein GI | 187927155 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1434] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.164009 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGCTC ACTTGCGCGT GTGCGGCGCC AACCTGGAGG AACCCGTGAG TCTGACCATC
CTGTGTGTGC TGGTGATCGT GGCAACGGTG TGCGCAGCAC GCGGCCGACG TCGGGCTGCG
CGCGGGCTGG CGGTGTTCTC CGGTGTGCTG GTGATCGCGA TCGGCTGCGG GCCGGTGCCC
GCGTGGCTGC TCGATTCGCT GGAAAAGCCG TTCGAGAACG AGCCCCATGT CCAATGGGGC
GCGCGCAACG CCATCGTGCT ACTGGGCGCG GGCACATTCC GCGTGGGCGA CTCGGTCGAG
CCGGGGCTGT TCTCGTATCC GCGGCTGGTG GAAACCACAC AGCTGTACCA GGCGTGCCGC
AAGTCAGATG GCGATTGCAA GATCCTCGTC AGCGGCGGCG ATGCACGTCA CCATGGCTCG
CCGGAAGCCA CCGTGTATCA GCGCGAGCTT GTCAGGCTGG GCGTCGCCAA GGACGACGTG
CTCATAGAGC CCCAGAGCAT GAACACGTGG CAGAACGCGC AATTCTCGCG CACGGTGTTG
GCGCAATACG GCGCTGATCG CACCGTGCTC GTTTCATCGG CCATCCATCT GCGGCGCAGC
CTGCTGTATT TCACGCACTT CGGCATGGCG CCGGTCCCCG TGCGCGCCGA CGATCTGCAG
GCCGCGGCGT CGCCCTTGCC GATGGCATAC AACTTTGCGC TGACCGACTT CGCACTGCAC
GAGTGGATCG GCATCGCGCG CTATCACATG TACAACGCGC TGGGCTGGAA CCCTGGGCGC
ATCAACCCCG GTGACGCCTG A
|
|---|
| Protein sequence | MGAHLRVCGA NLEEPVSLTI LCVLVIVATV CAARGRRRAA RGLAVFSGVL VIAIGCGPVP
AWLLDSLEKP FENEPHVQWG ARNAIVLLGA GTFRVGDSVE PGLFSYPRLV ETTQLYQACR
KSDGDCKILV SGGDARHHGS PEATVYQREL VRLGVAKDDV LIEPQSMNTW QNAQFSRTVL
AQYGADRTVL VSSAIHLRRS LLYFTHFGMA PVPVRADDLQ AAASPLPMAY NFALTDFALH
EWIGIARYHM YNALGWNPGR INPGDA
|
|---|
| |