Gene Rpic_0044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0044 
Symbol 
ID6287296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp55777 
End bp56685 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content63% 
IMG OID642623617 
Productband 7 protein 
Protein accessionYP_001897641 
Protein GI187927154 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.179688 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAG TCACGGCAAG CAAGCTGCCG GTCAAACTGC TCGCGCTCGT CTTCGGCGCC 
GTCGCGGCGC TGGTGATCGG GCGGACTTTC CTGCTGAACT GGCAGATCAT TCCGCCCGGC
TACACGGGCA TCAAGATCAA CCGGCTCGTC GATCGCGGCA TCACGCATGA AAACGTCGTC
ACCGGGTTCG TGTTCTACAA CCCCGTGCAG ACCGCGATCA TTCAGTACCC GACTTACGTG
CAGCGCGTGA TCTGGACGCA AGACGTGAAC GAAGGCCGCG CGCTCAACGA AGAACTGACG
TTCAACACGA AGGACGCCGT GCCCGTCAAC GTGGACGTGG CCGTCTCGTA CCAACTCGAT
CGCGAGAAGG TGCCGGCCTT CTACACCAAC TTCCGCGCCG ATCGCATCGA GACGTTCACG
CACGGCTACC TGCGCGACAC CGCGCGCAAC GTGATCGTCG CCATGGGCTC GGAATACAAC
TTTGACGACG TGAACGGCGG CAAGAAGGAA GAGTTTGTCG CGCGGCTGAC CAAGGAGCTG
GACACGCGGC TCGCACCGCT GGGCGTGTCG ATCAAGCAGT TCGGCATCGT CGGCTCGCTG
CGCCCGCCGC GTGCGCTGCT CGATGCAGTG AGCGCCAAGA CCAAGGCCAT CCAAGACGCG
ATCCGCACTG AAAATGAAGT GCGCTCCGCC CAGGCCGAGG CCAAGAAGAA AGTGGCGATT
GCCGAAGGCG AAGCCGCTGC CAACCATGCG CTCGCCTCGT CGCTGGATGA CCGGCTGCTC
GCCTGGGAAC GCTTGAAGCT CGAACGTGCC GCCATCGAGA AATGGAACGG CGTGACGCCG
AGCGTGATGG CTGGCGGCAA CGGCGGCGGC ATGTTTTTCA ACATCCCGGC GGGGGCGCAG
AGCAAGTAA
 
Protein sequence
MPEVTASKLP VKLLALVFGA VAALVIGRTF LLNWQIIPPG YTGIKINRLV DRGITHENVV 
TGFVFYNPVQ TAIIQYPTYV QRVIWTQDVN EGRALNEELT FNTKDAVPVN VDVAVSYQLD
REKVPAFYTN FRADRIETFT HGYLRDTARN VIVAMGSEYN FDDVNGGKKE EFVARLTKEL
DTRLAPLGVS IKQFGIVGSL RPPRALLDAV SAKTKAIQDA IRTENEVRSA QAEAKKKVAI
AEGEAAANHA LASSLDDRLL AWERLKLERA AIEKWNGVTP SVMAGGNGGG MFFNIPAGAQ
SK