Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0038 |
Symbol | |
ID | 6287396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 50205 |
End bp | 51098 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642623611 |
Product | lipid A biosynthesis lauroyl acyltransferase |
Protein accession | YP_001897635 |
Protein GI | 187927148 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.256445 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACGTC TCTCTGCCAA ACTCGGACTC GGCTTCTTGT GGCTGCTGTC CTTCCTGCCG TACGGCTTTG TCGCGCGTTT TGGCGAAGGC CTGGGCGGGC TGCTGTACCG CATTCCCAAT GGCCGCCGCC GCGTGGTGCT GGCCAACTTG CGCGCGTGCT TTCCCGAGAA GTCCGAAGCC GAGCGCGAAG CCATGGCGCA CGAAGTCTTC CGCAAGGTCT TCCGCAGCTT TGCCGAGCGC TCGTTTGCGT GGTTCGCGTC GGAAAAGCGC CTGATGCGCG TGGTGAAGAT CGACGACCAG GCCAATCTGC CAGCGCTGCA CGGCCAGCCG CACATTCTCG TCACGCTGCA TCTGTCGGGC GTGGAGATCG GCGCGCTGGC GCTCACCGAC TACCTGCGCA AGCACGTCGG CAACGCCGGC TGCTCGCTGT ACACGCGCAT GGCCAACCCG GTGCTCGATG ACGCCATCAA GGCGCTGCGC AGCCGCTTTG GCGCGACCAT GGTGTCGCGC AACGAAAACA TCCGCCAGAT CATGCGTACC ATCAAGCGCG GCGAGGCGCT GCAGCTCATC TCCGACATGG ATTTCGGCGA GCGCGACTCG GAGTTCGTGC CATTCTTTGG TGTACCGGCG CTCACGCTCA ACGCCATCCC GCGCATGGCA TCGATGACCG GTGCCAAGGT CGTGCCGATG TACACCGAGA TCCTGCCCAA CTACGAGGGC TACGCGCTGC GCATCCTGCC CGCGTGGGAG AACTACCCCA CCGGCGATCT GACCGCCGAC ACGCGCCGCA TGAACGCCTT CTTTGAAGAC GCGATACGCC CGCGCATCAC CGAGTACTAC TGGGTGCACA AGCGCTTCAA GCACCGTCCC GAGGGCATGC CGGGCATTTA TTGA
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Protein sequence | MERLSAKLGL GFLWLLSFLP YGFVARFGEG LGGLLYRIPN GRRRVVLANL RACFPEKSEA EREAMAHEVF RKVFRSFAER SFAWFASEKR LMRVVKIDDQ ANLPALHGQP HILVTLHLSG VEIGALALTD YLRKHVGNAG CSLYTRMANP VLDDAIKALR SRFGATMVSR NENIRQIMRT IKRGEALQLI SDMDFGERDS EFVPFFGVPA LTLNAIPRMA SMTGAKVVPM YTEILPNYEG YALRILPAWE NYPTGDLTAD TRRMNAFFED AIRPRITEYY WVHKRFKHRP EGMPGIY
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