Gene Rpic_0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0038 
Symbol 
ID6287396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp50205 
End bp51098 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content64% 
IMG OID642623611 
Productlipid A biosynthesis lauroyl acyltransferase 
Protein accessionYP_001897635 
Protein GI187927148 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.256445 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGTC TCTCTGCCAA ACTCGGACTC GGCTTCTTGT GGCTGCTGTC CTTCCTGCCG 
TACGGCTTTG TCGCGCGTTT TGGCGAAGGC CTGGGCGGGC TGCTGTACCG CATTCCCAAT
GGCCGCCGCC GCGTGGTGCT GGCCAACTTG CGCGCGTGCT TTCCCGAGAA GTCCGAAGCC
GAGCGCGAAG CCATGGCGCA CGAAGTCTTC CGCAAGGTCT TCCGCAGCTT TGCCGAGCGC
TCGTTTGCGT GGTTCGCGTC GGAAAAGCGC CTGATGCGCG TGGTGAAGAT CGACGACCAG
GCCAATCTGC CAGCGCTGCA CGGCCAGCCG CACATTCTCG TCACGCTGCA TCTGTCGGGC
GTGGAGATCG GCGCGCTGGC GCTCACCGAC TACCTGCGCA AGCACGTCGG CAACGCCGGC
TGCTCGCTGT ACACGCGCAT GGCCAACCCG GTGCTCGATG ACGCCATCAA GGCGCTGCGC
AGCCGCTTTG GCGCGACCAT GGTGTCGCGC AACGAAAACA TCCGCCAGAT CATGCGTACC
ATCAAGCGCG GCGAGGCGCT GCAGCTCATC TCCGACATGG ATTTCGGCGA GCGCGACTCG
GAGTTCGTGC CATTCTTTGG TGTACCGGCG CTCACGCTCA ACGCCATCCC GCGCATGGCA
TCGATGACCG GTGCCAAGGT CGTGCCGATG TACACCGAGA TCCTGCCCAA CTACGAGGGC
TACGCGCTGC GCATCCTGCC CGCGTGGGAG AACTACCCCA CCGGCGATCT GACCGCCGAC
ACGCGCCGCA TGAACGCCTT CTTTGAAGAC GCGATACGCC CGCGCATCAC CGAGTACTAC
TGGGTGCACA AGCGCTTCAA GCACCGTCCC GAGGGCATGC CGGGCATTTA TTGA
 
Protein sequence
MERLSAKLGL GFLWLLSFLP YGFVARFGEG LGGLLYRIPN GRRRVVLANL RACFPEKSEA 
EREAMAHEVF RKVFRSFAER SFAWFASEKR LMRVVKIDDQ ANLPALHGQP HILVTLHLSG
VEIGALALTD YLRKHVGNAG CSLYTRMANP VLDDAIKALR SRFGATMVSR NENIRQIMRT
IKRGEALQLI SDMDFGERDS EFVPFFGVPA LTLNAIPRMA SMTGAKVVPM YTEILPNYEG
YALRILPAWE NYPTGDLTAD TRRMNAFFED AIRPRITEYY WVHKRFKHRP EGMPGIY