Gene Rpic_0037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0037 
Symbol 
ID6287395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp49343 
End bp50191 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content68% 
IMG OID642623610 
Productlipid A biosynthesis lauroyl acyltransferase 
Protein accessionYP_001897634 
Protein GI187927147 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.182003 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTCC TGTTCTGGCT GTTTTCACGC TTGCCCCTAT CCGCGCTGCA GGCGCTGGGC 
GGCTGGCTGG GGGCGCTGGC GGCCAAGGTG CCCGGCCGCT ATCACGACCG GCTCATTGCC
AACTTCCGCC ACGCCTATCC CGACGTCACG CCCGCCATGC TCAAGGAGGC TGGGCGATCC
GCCGGCCGCA TGGTGTTCGA GATGCCCTAC TTCTGGGTGC GCAAGAACGG GGCGGACGTC
GCCCCTCACC TGTTCGACGT GTGCCGGACG GTCGTCGAGC GCGCGCTTGC AGATGGGCGC
GGCCTGATCT TCCTGACGCC GCACCTGGGC TGCTTTGAAG TGCTGCCGCA GGCCTATGCG
CGTGAGCACC CCGTCACCTC GCTGTTCAAG CCGCCGCGCA AGGCAAGCCT GCGCGGCTGG
ATTGAAACCA TGCGGGCGGG ACCGAACATG CAGATGGCAC CGGCAGACCC GCGTGGCGTG
CGCATGCTGG TGCGCGCACT CAAGCGCGGC GAGGCCGTCG GCATCCTGCC CGACCAGACC
CCCACCGCCG GCGAGGGCGT ATGGGCGCCG TTCTTCGGCA AGCCCGCCTA TACGATGACG
CTGGTGCACC GTTTGCATCG GCTCACGGGT GCACCCGTCG TGGCATTGTT TGCCGAACGG
CTGCCGCGCG GCGCAGGCTA TCGCCTGCAC TTGGAGGAGA TTGGCGATCT GCCCGAAGAC
GCAACGCAGG CCGCCACCCG CATCAATGCC GCCGTCGAAC GGTTGATTGC CGTGGCGCCG
ACGCAATATC TCTGGGGCTA TAACCGCTAC AAGCATCCCA AGGGCGCGGA CGCTCCGCCC
GCTGCCTGA
 
Protein sequence
MTFLFWLFSR LPLSALQALG GWLGALAAKV PGRYHDRLIA NFRHAYPDVT PAMLKEAGRS 
AGRMVFEMPY FWVRKNGADV APHLFDVCRT VVERALADGR GLIFLTPHLG CFEVLPQAYA
REHPVTSLFK PPRKASLRGW IETMRAGPNM QMAPADPRGV RMLVRALKRG EAVGILPDQT
PTAGEGVWAP FFGKPAYTMT LVHRLHRLTG APVVALFAER LPRGAGYRLH LEEIGDLPED
ATQAATRINA AVERLIAVAP TQYLWGYNRY KHPKGADAPP AA