| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0029 |
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| Symbol | |
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| ID | 6289740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 40695 |
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| End bp | 42893 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642623602 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001897626 |
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| Protein GI | 187927139 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.598305 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTTTC TCGCGCATCA CCATGACTGC CTCGGCTGGA ACGGTGAGAT GGCGCAGCGC
GTGCTGGCAT TCGATTGGGC CTCCACTGAA CTGGGCCCGA TCCAGGACTG GTCACCCAGC
CTGCGTGCCG CCGTGCACAT GGTGCTGGCG TGTCCGGTGC CGCTGGTCAT GCTGTGGGGC
CGCCACGGCT ACATGGTCTA CAACGATGCC TACGCCGTGT TTGCCGGCGG GCGTCATCCC
TATCTGCTGG GTTGCCCCGT TGAACTGGGC TGGCCCGAAG TGGCCGACTT CAACCGCCAT
GTCATGGACG TCTGCCTCGG TGGCGGCACG CTGTCGTACC GCGACAAGGA ACTTGTCCTG
CTGCGCAACG GCCGCCCCGA AGACGTGTGG ATGGATCTTT ACTACAGCCC GCTGCCCGAT
GACACCGGCC GCCCGGCGGG TGTGCTGGCC ATCGTGGTGG AAACCACCGA GCGCGTGCAG
ACCGAGCGCG AACGGCAGGC TGCCGAACAG GCCCTGCGCC AGTTGACCGA AACGCTGGAG
CAACGCGTGG CCGATGCGCT GTCTGCCCGC GCCGAAGTGG AAGCGCAATT GCGCCAGGCC
CAGAAGATGG AAGCCATCGG CAACCTGACC GGCGGCGTGG CCCACGACTT CAACAACGTG
CTCCAGGTGA TTGCCGGCAA TCTGCAGATG CTCTCGGTGG AGGCGCCGAA CAACACGCGC
GTGCAGCATC GGATTGCCGC CGCCACGCGT GCCGTGCAGC GCGGTGCCAC GCTGGCGGCG
CAGCTGCTCG CCTTTGCGCG CCGCCAGCAG CTCTCGCCGG CGGTCGTCAA CCCGACGCGG
CTGGTCCAAG GCATGAGCGA GATGCTGCAC CGCGCACTGG GCGAAGCCAT CAAGGTGGAA
ACGCACCTGG CCGCCGACTT GTGGAACGTC CAGGCCGACC GCAACCAGCT CGAGAACGCG
CTGCTGAACC TCGCCATCAA CGCACGCGAT GCTATGCGCG GCGGCGGCAT GCTCACCATT
GCCGCCAACA ACGTCACGCT CGACAACACA CAGGCGGACG TGCGTGATCA GCTTACCCCC
GGCGACTACC TTGTCTTCTC CGTCACCGAT ACCGGCGTGG GCATGCCGCC CGAAGTGGTC
GAACACGCTT TCGAGCCCTT CTTTACCACC AAGCCCGACG GCCACGGCAC GGGCCTGGGG
CTCAGCATGG TGTTCGGCTT CGTCAAGCAG AGCGGCGGGC ACATCGCCAT CGACAGTACA
GTCGGACAAG GCACCACGGT GCAGCTCTAC TTCCCGCGCT GCACGGAGGC GGCCCCGGAC
GATGCCGTCG AGCTGCGCGA CACCATCGTT ACGCCCATGG GCGGGCGCGA GACCATCCTC
GTGGTGGAGG ACGATACCGA CGTGCGCCTG ACCGCCGTCG ACATGCTGAC CCAACTCGGT
TACCGCGTGC TCACGGCCGC CAACGGCCAG GCCGCGCTCG ACCTCATGAA CAGCGGCACG
TCCATCGACC TGCTGTTTAC CGACGTGATC ATGCCAGGCC CCATCAAGGG CAGCGAACTG
TCGATACGCG CCGCGCAGCG CGTGCCGCCA CTGCCGGTGC TGCTCGTCTC GGGCTATCCG
CGTGACGAGG TGCAGCACGA CGGCAGGCTG CCGCCGGGTG TGACACTGCT CGGCAAGCCC
TACCGGCGTG ATGACCTGGC GCGCATGGTG CGCAACGTGC TCACCGCCAG CCGCACCGCG
CAGGCACAGG CGCAATCGGC ATCGCCATCG GCGGGCCCTG CCGTGGCTAC AGACGCTTCA
CAACCGCCTG CGGTGCTGCT GGTGGAAGAC GACACCGCCT CGCGCGAAGC CATGCAGGAG
GTGCTCACCA CCTTCGGCCT GCAATGCGTG GCCGCCGTCA ATGCCGAAGA CGCCCTTGCA
CTGGCCCGCA CGCGCTCCGT TCAGGTGCTG CTGACCGACC TCACCCTGCC CGGCCAATCC
GGCGCGAACC TCGCCCGCAC GCTGCTGCGC ATGCAACCGC AACTGCAGGT GCTGCTGATG
TCCGGCTATG GCACGGAAGC CGAGATTGGC GAGCCCATTG CCGGCGCACG CCTGCTCGGC
AAACCGATCG ACCTGATGAC GCTGCAGCAG GCGCTGGCGC CGTGGCTCGG CGCAACCGTA
AGGGCTGCCG ATACGCAGAA TGTGACGAAC GCCGCATAA
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| Protein sequence | MPFLAHHHDC LGWNGEMAQR VLAFDWASTE LGPIQDWSPS LRAAVHMVLA CPVPLVMLWG
RHGYMVYNDA YAVFAGGRHP YLLGCPVELG WPEVADFNRH VMDVCLGGGT LSYRDKELVL
LRNGRPEDVW MDLYYSPLPD DTGRPAGVLA IVVETTERVQ TERERQAAEQ ALRQLTETLE
QRVADALSAR AEVEAQLRQA QKMEAIGNLT GGVAHDFNNV LQVIAGNLQM LSVEAPNNTR
VQHRIAAATR AVQRGATLAA QLLAFARRQQ LSPAVVNPTR LVQGMSEMLH RALGEAIKVE
THLAADLWNV QADRNQLENA LLNLAINARD AMRGGGMLTI AANNVTLDNT QADVRDQLTP
GDYLVFSVTD TGVGMPPEVV EHAFEPFFTT KPDGHGTGLG LSMVFGFVKQ SGGHIAIDST
VGQGTTVQLY FPRCTEAAPD DAVELRDTIV TPMGGRETIL VVEDDTDVRL TAVDMLTQLG
YRVLTAANGQ AALDLMNSGT SIDLLFTDVI MPGPIKGSEL SIRAAQRVPP LPVLLVSGYP
RDEVQHDGRL PPGVTLLGKP YRRDDLARMV RNVLTASRTA QAQAQSASPS AGPAVATDAS
QPPAVLLVED DTASREAMQE VLTTFGLQCV AAVNAEDALA LARTRSVQVL LTDLTLPGQS
GANLARTLLR MQPQLQVLLM SGYGTEAEIG EPIAGARLLG KPIDLMTLQQ ALAPWLGATV
RAADTQNVTN AA
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