Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0019 |
Symbol | |
ID | 6287367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 30846 |
End bp | 31499 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642623592 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_001897616 |
Protein GI | 187927129 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGCCG ACATCCCTCT GTTGCCCATT CTCCTCAAGC TGGGGGAGGG ACTGCTTGCC ACGCTCATGC TGTCGCTCAT GGCCTTTGCG CTGGGCGGCA CGGCCGGCCT GGTGGTGCTG TTTGCCCGTG TGGGGCGCAA CGCCACGCTT CAGCGCGTGA GCAAGGCGTA CATCCAGCTC TTCCAGAACA CGCCGCTGCT CATGCAGATG TTCATCGTGT TCTTTGGTGC GTCCATGGCG GGGTTTGAGA TGTCGCCGTG GACGGCTGCC GCCATCGGCC TGACGCTGTA CACCAGTGCC TATCTGGCCG AGGTGTGGCG CGGCTGTGTC GAGGCCATTC CGCGCGGGCA GTGGGAAGCG TCTTCCAGCC TGGCGATGGG CTACTTCCAG CAGATGCGCC ACGTGGTGCT GCCGCAGGCG GTGCGCCTGT CGATTGCGCC CACGGTCGGG TTCTCCGTGC AGATCGTCAA GGGCACGGCG GTGGCGTCCA TCATCGGGTT TGAAGACCTG TCCAAGCTGG GTTCGGTGCT GGCCAATGCC ACCTTCCAGC CATTCCTTAT CTACGGGCTG GTAGCCATTG GGTATTTCGC GCTGTGCTGG CCGCTGTCTC TTTACGCCTC TCATCTGGAA AAGAAGCTCT ATGCCGCTCG TTGA
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Protein sequence | MIADIPLLPI LLKLGEGLLA TLMLSLMAFA LGGTAGLVVL FARVGRNATL QRVSKAYIQL FQNTPLLMQM FIVFFGASMA GFEMSPWTAA AIGLTLYTSA YLAEVWRGCV EAIPRGQWEA SSSLAMGYFQ QMRHVVLPQA VRLSIAPTVG FSVQIVKGTA VASIIGFEDL SKLGSVLANA TFQPFLIYGL VAIGYFALCW PLSLYASHLE KKLYAAR
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