Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0017 |
Symbol | |
ID | 6287738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 29130 |
End bp | 29957 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642623590 |
Product | extracellular solute-binding protein family 3 |
Protein accession | YP_001897614 |
Protein GI | 187927127 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGCA TCACTGCCCG CCACGCTTCG CGCCCCACCT CGCGTCGCTT CTTCCTCCAT GCCGTCATGG CGGCCAGCGC TGTTGCGGCG TTGTTGCCCG GCCGCCCGGC CCATGCCGAT GCGCTGGCCA ACATCCAGAA AGCCGGCGTG ATCCGCGTGG CCATCCCGAA CGATTTCCCG CCGTTCGGCT CGCTGGGGCC AGACCTCAAG CTGCAGGGCT ATGACATCGA CATGGCCGGC CTTATCGCCA AGGAGCTCGG CGTCAAGGCA GAGCTGGTGC CCGTCACCAG CACCAACCGC ATTCCGTTCC TCACCACGGG CAAGGTGGAT GTCGTCATCT CCAGCCTCGG TAAGAACGCC GAGCGCGCCA AGGTGATCGA CTTCACGCAG GCGTATGCGC CGTTCCCCAA GAGCGTGTAC GGCCCGAAGG ATGTGTCGAT CAAGGGGCCG GCAGATCTGG CTGGCAAGAC GATCGGCGTC ACGCGCGGCT CGACTGAAGA TCTGGCGCTC TCGGCCGTGG CGCCGGCGTC GGCCACCATC AAGCGCTATG AAGACAACAA CGCCACCGCG CAGAGCTACC TGATCGGCCA GGTGCAACTG GTGACGGTGG GCAACATCGT CGCCAACGCG GTGAACGAGC GCACGAAGCT GCGCCAGCTC GACCTGAAGT TCCCCGTGGA AGACACGCCT TGCTATGTGG GTGTGGCCAA GGGCGAGCCC GCGCTGCTCG ACAAGGTGAA CACCGTCATC ACCAAGCTGA AGACGGATGG CCGCCTGAAC GATCTGTCGC AGCGCTGGAT CAAGATGCCG CTGCCCGCAA AGCTGTAG
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Protein sequence | MTRITARHAS RPTSRRFFLH AVMAASAVAA LLPGRPAHAD ALANIQKAGV IRVAIPNDFP PFGSLGPDLK LQGYDIDMAG LIAKELGVKA ELVPVTSTNR IPFLTTGKVD VVISSLGKNA ERAKVIDFTQ AYAPFPKSVY GPKDVSIKGP ADLAGKTIGV TRGSTEDLAL SAVAPASATI KRYEDNNATA QSYLIGQVQL VTVGNIVANA VNERTKLRQL DLKFPVEDTP CYVGVAKGEP ALLDKVNTVI TKLKTDGRLN DLSQRWIKMP LPAKL
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