Gene Rpic_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0017 
Symbol 
ID6287738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp29130 
End bp29957 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content65% 
IMG OID642623590 
Productextracellular solute-binding protein family 3 
Protein accessionYP_001897614 
Protein GI187927127 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCA TCACTGCCCG CCACGCTTCG CGCCCCACCT CGCGTCGCTT CTTCCTCCAT 
GCCGTCATGG CGGCCAGCGC TGTTGCGGCG TTGTTGCCCG GCCGCCCGGC CCATGCCGAT
GCGCTGGCCA ACATCCAGAA AGCCGGCGTG ATCCGCGTGG CCATCCCGAA CGATTTCCCG
CCGTTCGGCT CGCTGGGGCC AGACCTCAAG CTGCAGGGCT ATGACATCGA CATGGCCGGC
CTTATCGCCA AGGAGCTCGG CGTCAAGGCA GAGCTGGTGC CCGTCACCAG CACCAACCGC
ATTCCGTTCC TCACCACGGG CAAGGTGGAT GTCGTCATCT CCAGCCTCGG TAAGAACGCC
GAGCGCGCCA AGGTGATCGA CTTCACGCAG GCGTATGCGC CGTTCCCCAA GAGCGTGTAC
GGCCCGAAGG ATGTGTCGAT CAAGGGGCCG GCAGATCTGG CTGGCAAGAC GATCGGCGTC
ACGCGCGGCT CGACTGAAGA TCTGGCGCTC TCGGCCGTGG CGCCGGCGTC GGCCACCATC
AAGCGCTATG AAGACAACAA CGCCACCGCG CAGAGCTACC TGATCGGCCA GGTGCAACTG
GTGACGGTGG GCAACATCGT CGCCAACGCG GTGAACGAGC GCACGAAGCT GCGCCAGCTC
GACCTGAAGT TCCCCGTGGA AGACACGCCT TGCTATGTGG GTGTGGCCAA GGGCGAGCCC
GCGCTGCTCG ACAAGGTGAA CACCGTCATC ACCAAGCTGA AGACGGATGG CCGCCTGAAC
GATCTGTCGC AGCGCTGGAT CAAGATGCCG CTGCCCGCAA AGCTGTAG
 
Protein sequence
MTRITARHAS RPTSRRFFLH AVMAASAVAA LLPGRPAHAD ALANIQKAGV IRVAIPNDFP 
PFGSLGPDLK LQGYDIDMAG LIAKELGVKA ELVPVTSTNR IPFLTTGKVD VVISSLGKNA
ERAKVIDFTQ AYAPFPKSVY GPKDVSIKGP ADLAGKTIGV TRGSTEDLAL SAVAPASATI
KRYEDNNATA QSYLIGQVQL VTVGNIVANA VNERTKLRQL DLKFPVEDTP CYVGVAKGEP
ALLDKVNTVI TKLKTDGRLN DLSQRWIKMP LPAKL