Gene Bphyt_3976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3976 
Symbol 
ID6280932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4454712 
End bp4455392 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content65% 
IMG OID642623563 
ProductCheW protein 
Protein accessionYP_001897587 
Protein GI187925945 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGAGG TGCAAACGGT GAGCTTCGAC GATTGCTGGA ATCGCATCGG CGTGCGCGGC 
GATTCGTCGT GCGAGCGACT TGTCGAGTAC GTACGCTGCC TCAATTGCCC AGTGTTCGAA
ACGGCCGCCG CCAAACTGCT GGAACGGCCG ATTCCATTGG TGGACCTCTC GCGGCACGAC
GTGCGCGCGC GGGCACAACC GCAGCAAAAT GCGCAAGGCG CGAGCGAATC GTTTCTCGTC
TTTCGCATCG GCGACGAATG GCTCGCGCTG CCCACGCCAA TCTTCAAACG CATCGTGCAG
ACGCGGCCGA TTCATACGTT GCCGCATCGG CAGCATCGCG CGGTACTGGG CGTGGTGAAT
GTACAAGGTG AATTGCTGGT GTGCCTGTCG CTCGCGCACC TGCTCGGTTT CGAAACCGGC
GCCAACGCAC GCGACGATCG AGCGCGCCAC GATCTGCCGC GTTTCCTCGT CGTCTCGCGC
GCTGAAGAAC ACGCGGTGTT CCCGGTGGAT CAGGTCGACG GCGTGCACCG GATCGCGACG
GCCAGCTTGT GCGCGCCGCC CGCCACACTT TCGCATGCCG CCGCTGCCCA CACGCGAGCG
GTCGCGCCGT GGCGCGGCAT GAGCGTCGGC CTGCTCGACG CCGACGCGCT CTTCGACACT
TTGAACCGGA GCCTCGGATG A
 
Protein sequence
MAEVQTVSFD DCWNRIGVRG DSSCERLVEY VRCLNCPVFE TAAAKLLERP IPLVDLSRHD 
VRARAQPQQN AQGASESFLV FRIGDEWLAL PTPIFKRIVQ TRPIHTLPHR QHRAVLGVVN
VQGELLVCLS LAHLLGFETG ANARDDRARH DLPRFLVVSR AEEHAVFPVD QVDGVHRIAT
ASLCAPPATL SHAAAAHTRA VAPWRGMSVG LLDADALFDT LNRSLG