| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3938 |
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| Symbol | |
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| ID | 6282048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 4413383 |
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| End bp | 4414600 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642623525 |
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| Product | general secretion pathway protein F |
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| Protein accession | YP_001897549 |
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| Protein GI | 187925907 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.147565 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGCAT TTCGTTTCGA AGCAATCGAC GCGACGGGCA AGGCGCAAAA AGGCGTGCTC
GACGCCGACA GCGCGCGCGG CGCGCGGACC AATCTGCGCT CGCAAGGACT GACGCCGCTC
GTCGTAGAGC CGGCGGCTAC GCGCACGCGC GGCGAGCGCA ATCAACGGCT GTCGCTAGGG
CGGCGTCTGT CGCAACGCGA GCAGGCGATC CTGACGCGCC AGCTCGCCAG CCTGCTGATC
GCGGGCCTGC CGCTCGACGA AGCGCTCGCG GTGCTCACGG AGCAATCGGA GCGCGACTAC
ATTCGCGAGC TGATGGCGTC GATTCGCGCG GAAGTGCTCG GCGGCCACTC GCTGGCCAAT
GCGCTGACGC AGCATCCGAA AGACTTCCCC GAGATTTATC GCGCGCTGGT CGCGGCCGGT
GAACATACCG GCAAGCTCGG CCTCGTGCTG TCGCGGCTCG CCGACTACAT CGAGCAACGC
AACGCGCTGA AGCAGAAGAT CGTGCTCGCG TTCACGTACC CCACCATCGT CACGATCATC
GCGTTCGGCA TCGTCACGTT TCTGTTGAGC TATGTGGTGC CGCAGGTGGT GAACGTGTTC
GCCAGCACCA AGCAGCAACT GCCCTTCCTC ACCATCATGA TGATGGCGCT TTCCGGGTTC
GTGCGGAACT GGTGGTGGGC GATGCTGATC GGCGTGATCG TGCTGGTGTA TCTGGTGCGC
TCGATTCTCA GGCAACCCGG CCCGCGTCTC GCGTTCGACC GGTGGCTGCT CACCGCACCG
CTGCTCGGCA AACTCGTGCG CGGCTACAAC ACCGTGCGCT TTGCCAGCAC GCTCGGCATT
CTCACCGCGG CCGGCGTGCC GATTCTGCGC GCGCTGCAAG CCGCCGCCGA AACGCTCAGC
AACAACGCGA TGCGCGAGAA CATCGACGAT GCGATCGTGC GTGTGCGCGA AGGCACGTCG
CTGTCACGCG CGCTCGGCAA CACGAAGACG TTTCCGCCCG TGCTGGTGCA CCTGATCCGT
TCGGGCGAAG CGACCGGCGA CGTGACCACG ATGCTCGACC GCGCGGCCGA CGGTGAAGCC
CGCGAACTCG AACGCCGCAC GATGTTCCTG ACGAGTCTGC TGGAGCCGTT GCTGATTCTG
GCGATGGGGG GAGTGGTGCT GGTGATCGTG CTGGCAGTGA TGCTGCCGAT CATCGAATTG
AACAACCTGG TGCAGTAG
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| Protein sequence | MPAFRFEAID ATGKAQKGVL DADSARGART NLRSQGLTPL VVEPAATRTR GERNQRLSLG
RRLSQREQAI LTRQLASLLI AGLPLDEALA VLTEQSERDY IRELMASIRA EVLGGHSLAN
ALTQHPKDFP EIYRALVAAG EHTGKLGLVL SRLADYIEQR NALKQKIVLA FTYPTIVTII
AFGIVTFLLS YVVPQVVNVF ASTKQQLPFL TIMMMALSGF VRNWWWAMLI GVIVLVYLVR
SILRQPGPRL AFDRWLLTAP LLGKLVRGYN TVRFASTLGI LTAAGVPILR ALQAAAETLS
NNAMRENIDD AIVRVREGTS LSRALGNTKT FPPVLVHLIR SGEATGDVTT MLDRAADGEA
RELERRTMFL TSLLEPLLIL AMGGVVLVIV LAVMLPIIEL NNLVQ
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