| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3935 |
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| Symbol | |
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| ID | 6282045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4408482 |
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| End bp | 4408928 |
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| Gene Length | 447 bp |
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| Protein Length | 148 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642623522 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_001897546 |
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| Protein GI | 187925904 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAA ACTTCGTCAC CGTCGCAGTA GGACTTGCCG TGCTGATATC AGCAGGGTCC
GCGCGCGCCG ACTGCTTTGA CGAAGCCGCG AAGTATCAGA AGGTCAACCC CTTGATTCTG
CGCGCAATTG CGTGGCAGGA GTCACACAAT CGTCCGGACG CAACGCATAA AAATGCGAAC
GGCTCGACCG ACTACGGGGT GATGCAGATC AATTCGATCC ATCTGCCCGT GCTCGCCCAG
TATGGCATCT CGCAAGGCAC GCTCATGGAG CCGTGCAAGA ACGTCTACAT AGCGGCATGG
CATCTGCGCC GCCAGATGAA CAAGTACGGC AATACGTGGC AGGCAATCGG CGCCTATCAC
TCTGAGACGC CGGCGCTGCG GGACAAGTAC GCGCAGCAGA TCGCCGCGAT CCTGCGCAAG
TGGAATCTGA TGCCGGCTGC GCGCTGA
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| Protein sequence | MKRNFVTVAV GLAVLISAGS ARADCFDEAA KYQKVNPLIL RAIAWQESHN RPDATHKNAN
GSTDYGVMQI NSIHLPVLAQ YGISQGTLME PCKNVYIAAW HLRRQMNKYG NTWQAIGAYH
SETPALRDKY AQQIAAILRK WNLMPAAR
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