Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3929 |
Symbol | |
ID | 6280884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 4399677 |
End bp | 4400315 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642623516 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_001897540 |
Protein GI | 187925898 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000837661 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAG GCGTATACGG AGAACAGGCG ACCGGGCGGG TGACCCACAG CCTATTGCGA TTGAGCACGG CAATGCGGAG CCAGGCTTGG GAATGGGCGG AGGGCGCTGG CCTGACGCCG ACCCAGGGCG AAATTCTGGT CTTGCTGATG CAACGCAAAG GCCCGATGCG TCTCGGCGAA ATTGCCCGTG AAACGGCGCT CACCGCCGCG ACGACCAGCG ATGCAGTCAG CACGCTCGAA ACCAAGGGGC TGGTCGAAAA GCGCCGTGCC CTCGACGACG GCCGTGCCCT CGCGGTCCGC CTGACGGCGC GTGGCCGTAC GGCCGCGAAG CGCGCCGCGC AGTGGCCGGA CTTCCTGGCC AAGGCGGTCG GCACGCTGCG CGACGACGAG CAGGCGGTGT TCTATCGCAC GCTGCTCAAG ACCGTTCATC AGCTGGAAGC GCAAGGCACG ATTCCGCCGC ACCGCATGTG CCTGAGCTGC ACGCACTTCG AGCCGAGCAA GAACCCGAAG AAGACGCCGC ATCATTGCGC GTTGCTCGAC CTGAACATGT CGGATACGGA TCTGCGCCTC GACTGCTCGG TGTATGAGAT GGCCGACGTC GCCACCCAGA AGAAGACCTG GAAGATCTTC GCCCAATAA
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Protein sequence | MSEGVYGEQA TGRVTHSLLR LSTAMRSQAW EWAEGAGLTP TQGEILVLLM QRKGPMRLGE IARETALTAA TTSDAVSTLE TKGLVEKRRA LDDGRALAVR LTARGRTAAK RAAQWPDFLA KAVGTLRDDE QAVFYRTLLK TVHQLEAQGT IPPHRMCLSC THFEPSKNPK KTPHHCALLD LNMSDTDLRL DCSVYEMADV ATQKKTWKIF AQ
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