Gene Bphyt_3929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3929 
Symbol 
ID6280884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4399677 
End bp4400315 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content65% 
IMG OID642623516 
Producttranscriptional regulator, MarR family 
Protein accessionYP_001897540 
Protein GI187925898 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000837661 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAG GCGTATACGG AGAACAGGCG ACCGGGCGGG TGACCCACAG CCTATTGCGA 
TTGAGCACGG CAATGCGGAG CCAGGCTTGG GAATGGGCGG AGGGCGCTGG CCTGACGCCG
ACCCAGGGCG AAATTCTGGT CTTGCTGATG CAACGCAAAG GCCCGATGCG TCTCGGCGAA
ATTGCCCGTG AAACGGCGCT CACCGCCGCG ACGACCAGCG ATGCAGTCAG CACGCTCGAA
ACCAAGGGGC TGGTCGAAAA GCGCCGTGCC CTCGACGACG GCCGTGCCCT CGCGGTCCGC
CTGACGGCGC GTGGCCGTAC GGCCGCGAAG CGCGCCGCGC AGTGGCCGGA CTTCCTGGCC
AAGGCGGTCG GCACGCTGCG CGACGACGAG CAGGCGGTGT TCTATCGCAC GCTGCTCAAG
ACCGTTCATC AGCTGGAAGC GCAAGGCACG ATTCCGCCGC ACCGCATGTG CCTGAGCTGC
ACGCACTTCG AGCCGAGCAA GAACCCGAAG AAGACGCCGC ATCATTGCGC GTTGCTCGAC
CTGAACATGT CGGATACGGA TCTGCGCCTC GACTGCTCGG TGTATGAGAT GGCCGACGTC
GCCACCCAGA AGAAGACCTG GAAGATCTTC GCCCAATAA
 
Protein sequence
MSEGVYGEQA TGRVTHSLLR LSTAMRSQAW EWAEGAGLTP TQGEILVLLM QRKGPMRLGE 
IARETALTAA TTSDAVSTLE TKGLVEKRRA LDDGRALAVR LTARGRTAAK RAAQWPDFLA
KAVGTLRDDE QAVFYRTLLK TVHQLEAQGT IPPHRMCLSC THFEPSKNPK KTPHHCALLD
LNMSDTDLRL DCSVYEMADV ATQKKTWKIF AQ