| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3905 |
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| Symbol | |
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| ID | 6281863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4372378 |
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| End bp | 4374336 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642623492 |
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| Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
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| Protein accession | YP_001897516 |
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| Protein GI | 187925874 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
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| TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTTTC CCACAGAATT TGACGTAATC GTCGTCGGCG GCGGTCATGC CGGTACCGAA
GCGGCTTTAG CTTCGGCGCG CATGGGTAAC ACCACGCTCC TGCTGACCCA CAACATCGAA
ACCCTTGGCC AGATGAGCTG CAATCCGTCT ATTGGCGGCA TTGGCAAAGG CCATCTCGTG
AAGGAAGTCG ACGCGCTCGG TGGTGCCATG GCGGCCGCAA CGGACGAGGG CGGCATCCAG
TTCCGTATCC TGAATTCGTC GAAGGGGCCG GCCGTTCGCG CGACGCGCGC CCAAGCTGAC
CGTCTGCTGT ACAAGCAGGC GATCCGGCAT CGGCTTGAGA ATCAGCCGAA CCTCTGGCTA
TTCCAGCAAG CAGTCGACGA TTTGATGGTG GAAGGCGACC GCGTCGTCGG CGCTGTGACG
CAGGTGGGAA TCCGTTTTCG CGCGCGCGCA GTGGTTTTGA CGGCCGGGAC GTTCCTTGAC
GGCAAGATTC ACGTGGGTTT GAACAACTAC ACCGGCGGCC GCGCGGGCGA TCCAGCCGCA
GTGTCGCTGT CTGCGCGTCT TAAGGAATTG AAGCTGCCGC AAGGTCGCCT TAAGACGGGG
ACGCCGCCAC GGATTGACGG CCGCACGATC GATTTTTCGC AACTCGAAGA GCAGCCAGGT
GATCTGGATC CGGTGCCGGT CTTCTCGTTT CTTGGACGCG TTGAGCAGCA TCCACGGCAA
GTGCCGTGCT GGGTGACGCA TACGAACGAG CGCACGCACG ACATCATTCG CGGCGGTCTC
GACCGTTCGC CGATGTACAC CGGCGTGATC GAAGGAGTGG GGCCGCGCTA TTGCCCGTCG
ATCGAGGACA AGATTCACCG GTTTGCATCG AAGGAATCGC ATCAGATCTT CCTTGAACCG
GAGGGACTGA CGACCAATGA GTTCTATCCC AATGGGATTT CCACCAGCTT GCCATTCGAT
GTGCAGCTGG AACTCGTGCG TTCGATGCGT GGCTTGGAGC ACGCACACAT TCTGCGGCCG
GGCTATGCCA TCGAATATGA CTACTTTGAC CCGCGCGGGC TGAAGGCGTC GCTGGAAACC
AAGGTAATTA ACGGACTGTT CTTCGCCGGC CAGATCAACG GTACGACTGG CTATGAAGAG
GCGGCGGCGC AGGGTCTGCT CGCCGGTATC AATGCCGGTC TGTTTGTTCA AGGCAAGGAA
GCGTGGTGCC CGCGGCGCGA TCAGGCCTAT CTCGGTGTAC TCGTTGACGA TCTGGTGACG
CGCGGCGTGT CGGAGCCGTA TCGCATGTTC ACGAGCCGTG CGGAATACCG CTTGAGCCTG
CGTGAAGACA ATGCGGATAT GCGCCTGACG GAGATTGGCC GTGAGTTGGG CGTCGTTGAC
GACATACGCT GGGACGCTTT CAGCCGCAAG CGCGACGCTG TTTCACGTGA AACAGAGCGT
CTTCGCACGA CCTGGGTCAA TCCTAAGACA TTACCGGCTG ACGAAGCGAC GCCGCTGCTC
GGCAAGCCGA TCGACCACGA GTACAGTCTG GCGGATCTCC TGCGTCGCCC GGGTGTCTCT
TACGACGGGG TTTGCGGGTT GCGCGCGGGC GCCTGTGCCG CGCCGGAAGC CTTAGCCGAA
GACGACGTGC TGCTGGCCCA GATCAAAGAA CAGATCGAGA TCGGCATCAA ATATCAGGGC
TACATCGATC GCCAAGCTGG CGAAATCGAG CGGAACGAGG CGCACGAAAG CACGCGTTTG
CCCGAAGGCG TGGACTATGC CGAAGTACGA GGGCTGTCAT TCGAGGCGCG TCAGAAGCTG
ACGCAATTCC GCCCTGAAAC CATCGGCCAG GCATCACGCA TTTCGGGCAT TACGCCTGCG
GCGATTTCCT TGCTGATGGT CCATCTGAAG CGCGGTTTGG GCCGTCGTCC GACAAAACCC
GCCGAGCCTG GCGCTGACAA CAAGCCGGTG ACGCAATGA
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| Protein sequence | MLFPTEFDVI VVGGGHAGTE AALASARMGN TTLLLTHNIE TLGQMSCNPS IGGIGKGHLV
KEVDALGGAM AAATDEGGIQ FRILNSSKGP AVRATRAQAD RLLYKQAIRH RLENQPNLWL
FQQAVDDLMV EGDRVVGAVT QVGIRFRARA VVLTAGTFLD GKIHVGLNNY TGGRAGDPAA
VSLSARLKEL KLPQGRLKTG TPPRIDGRTI DFSQLEEQPG DLDPVPVFSF LGRVEQHPRQ
VPCWVTHTNE RTHDIIRGGL DRSPMYTGVI EGVGPRYCPS IEDKIHRFAS KESHQIFLEP
EGLTTNEFYP NGISTSLPFD VQLELVRSMR GLEHAHILRP GYAIEYDYFD PRGLKASLET
KVINGLFFAG QINGTTGYEE AAAQGLLAGI NAGLFVQGKE AWCPRRDQAY LGVLVDDLVT
RGVSEPYRMF TSRAEYRLSL REDNADMRLT EIGRELGVVD DIRWDAFSRK RDAVSRETER
LRTTWVNPKT LPADEATPLL GKPIDHEYSL ADLLRRPGVS YDGVCGLRAG ACAAPEALAE
DDVLLAQIKE QIEIGIKYQG YIDRQAGEIE RNEAHESTRL PEGVDYAEVR GLSFEARQKL
TQFRPETIGQ ASRISGITPA AISLLMVHLK RGLGRRPTKP AEPGADNKPV TQ
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