| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3810 |
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| Symbol | |
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| ID | 6281425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4261456 |
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| End bp | 4262271 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642623397 |
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| Product | chemoreceptor glutamine deamidase CheD |
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| Protein accession | YP_001897422 |
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| Protein GI | 187925780 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCG CCTTGCCAAT TGCCACCAAT CTGTACTTCG ACAACCACTT CCAACGCCCC
GGCGTGAAGC TGTTGCCGAA CGAGTTCTAC ACCACGCACG AAGACATGGT GCTGGTTACC
GTGCTCGGTT CCTGCGTCGC GGCCTGCATC CAGGATCGCA CGGCGGGCAT CGGCGGCATG
AATCACTTCA TGTTGCCCGA CGACGGCGCG GACGTCGCGC AGGCCGCATC GGATTCGATG
CGCTACGGCG CCTACGCAAT GGAAGTGCTG ATCAACGAAC TGATCAAGGC CGGCGGCCGG
CGCGAGCGTT TCGAAGCCAA GGTTTTCGGC GGCGGCGCGG TGCTCGCCGG CATGACGACG
ATGAACATAG GCGACCGCAA TTCGGAGTTC GTGCGCCGCT ATCTGGCGGT GGAGAAAATC
CGCATCGTCG CCGAAGACTT GCAGGGCTCG CATCCGCGCA AGGTGGCGTT CATGCCGCGC
ACGGGCCAGG TGATGGTGAA GAAGTTGCGC CTGCAGCAGG AAGCGGGCGT GGCCGAGCGC
GAACAGGCGC TGATGCGGCA AAGCGCCGAA GCGCGTGCCG AGCGGCTCGC CGCGGCGCGC
AAGCGGGTGG AACTGTTCTC GACGCCGGCC GCGCCGAGAG CCAAGGTCGA ACTGTTTTCG
AGTTCCGCAG GCGCTCGTCC GAAGGTCGAG CTGTTCGGCT CGCCGGCGGG AACAGCGGCG
GGCAGTGCGG GCGCAGGCGC AGCAAAGCCA CGCATCGAAC TGTTCGGAAC GCGCCCGATC
AATTCAAACA ACGCCAGAAC CACAGAGGAG GCGTGA
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| Protein sequence | MSSALPIATN LYFDNHFQRP GVKLLPNEFY TTHEDMVLVT VLGSCVAACI QDRTAGIGGM
NHFMLPDDGA DVAQAASDSM RYGAYAMEVL INELIKAGGR RERFEAKVFG GGAVLAGMTT
MNIGDRNSEF VRRYLAVEKI RIVAEDLQGS HPRKVAFMPR TGQVMVKKLR LQQEAGVAER
EQALMRQSAE ARAERLAAAR KRVELFSTPA APRAKVELFS SSAGARPKVE LFGSPAGTAA
GSAGAGAAKP RIELFGTRPI NSNNARTTEE A
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