Gene Bphyt_3779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3779 
Symbol 
ID6281849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4230725 
End bp4231336 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content69% 
IMG OID642623366 
Productflagellar biosynthesis protein FliO 
Protein accessionYP_001897391 
Protein GI187925749 
COG category[N] Cell motility 
COG ID[COG3190] Flagellar biogenesis protein 
TIGRFAM ID[TIGR03500] flagellar biosynthetic protein FliO 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGCG TTGCCGGTCG CGCCGTGTCG CGCACTGTTC TGAATCGCGC TGCACGGGCG 
GTGAACGTCG TCGCGGCCGC ATGCTTCACT GCATCGATCT ACACGCTGCT CGCACCTTCG
GCCGCGCTCG CGGCGGACAT GAACGCGGTC AACAACGCGG CGAAGATCGC CTCGGGCGTC
GGCGCGGGTT CTGCTGTTCC GGCGCTCGGC GTCGGCGCGG TATTGCAAAC CATTGTCGGG
CTGCTGGTCG TGATCGGTCT GGTGTTCGGT TGCGCGTGGC TCGCTCGCCG CTTCGGCTTG
CAGCCGGCGA ATCGCGGCGG TCTCGTGAAG ACCATCGGCG GCGCCTCGCT CGGGGGCAAG
GAGCGGGTCG CGGTGGTCGA GATCGGCGAT ACGTGGCTCG TGCTCGGCAC GGCGCCCGGC
AATGTCCGTC TGCTTCACAC GATGCCGGCC GGCTCGGCCG CCGTCGATCC GCTCGGCGCC
ACGCAAGCCG GTCCCGCCAG CGCGGCCGCC AGCGGCACGG CACTGCCAGG CACCTTCGGC
CAACGCTTTC GCGACGCTTT AAAAGGCGAA GTGGGCAAAC GTTTCAACGG GCAAGGCGGC
GGGGTTCGGT AA
 
Protein sequence
MNRVAGRAVS RTVLNRAARA VNVVAAACFT ASIYTLLAPS AALAADMNAV NNAAKIASGV 
GAGSAVPALG VGAVLQTIVG LLVVIGLVFG CAWLARRFGL QPANRGGLVK TIGGASLGGK
ERVAVVEIGD TWLVLGTAPG NVRLLHTMPA GSAAVDPLGA TQAGPASAAA SGTALPGTFG
QRFRDALKGE VGKRFNGQGG GVR