| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3754 |
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| Symbol | |
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| ID | 6282020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4201727 |
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| End bp | 4203355 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642623341 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_001897366 |
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| Protein GI | 187925724 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR03159] CRISPR-associated protein Csc1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.884226 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAAA ACAATCTGTT GCGCGCCGCG CGTGTTACGA CGCTCGTCGC AGCTGCAGCG
GCATCGATGG TGGGCGCAAG TGTCGCGCGC GCCGAGATTC CGAATAAAAC CCTGGTCTAC
TGCTCAGAAG GCAGCCCTGC GGGTTTTGAT CCTGCCCAAT ACACCACGGG CACCGATTTC
ACGGCCAATA CGTTCACCGT CTACAACCGT CTCGTCGAAT TCGAACGCGG CGGCACCAAG
GTCGAACCGG GCCTTGCGGA AAAGTGGGAT GTGTCCGCGG ACGGCAAGAC GTACACGTTC
CATCTGCGTC ATGGCGTGAA GTTCCAGACC ACCTCGTTCT TCAAGCCGAC GCGCGAATTC
AACGCGGACG ACGTCGTGTT CACGTTCCAG CGCATGCTGG ACCCGAACTC GGCCTTTCAT
AAGGCTTACC CGGTCCAGTT CCCGTACTTC ACGGACATGG GCCTCGACAA GCTGATCACC
GGCGTCGAAA AGGTCGATCC GTACACGGTC AAGTTCACGC TGAAGGAAGT CAACGCGCCG
TTCATCCAGA ATCTGGCAAT GGAATACGCG TCGATCCTGT CGAGCGAATA CGGCGACCAG
TTGATGAAAG CCGGCAAGGC CGCCGACATC AACCAGTTCC CGGTCGGCAC GGGCCCGTTC
ATTTTCAAGA GCTACACGAA AGATGCAACG ATCCGCTTCG ACGGCAATCC GGATTACTGG
AAGCCGAACA CGGTGAAGAT CTCGAAGCTG ATCTTCTCGA TCACGCCGGA CGCCGGCGTG
CGCGTGCAGA AGATCAAGCG CGACGAATGC CAGGTGATGA GCTATCCGCG TCCGGCCGAT
ATCGCGCCGC TGAAGGCTGA AGCGAACATC GCAATGCCGT CGCAACCGGG CTTCAACCTC
GGCTACCTCG CGTACAACGT GTCGCACAAG CCGGTCGACA AGGTCGAAGT GCGTCAGGCG
CTCGACATGG CGATCAACAA GAAGGCGATC ATCGACTCCG TGTACCAGGG CGCAGGCCAG
GCCGCCACGA ATCCGATGCC GCCGACCCAA TGGTCGTACG ACAAGAACCT GAAGGGCGCG
GCCTACGATA CGGACAAGGC CAAGGCGCTG CTGGCCAAGG CTGGCTATCC GAACGGCTTT
GACATCACGC TGTGGGCGAT GCCGGTGCAA CGCGCCTACA ACCCGAACGC CCGCCTGATG
GCGGAAATGA TCCAGGCCGA TTGGGCCAAG ATCGGCGTGA AGGCGAAGAT CGTCACGTAT
GAGTGGGGCG AGTACATCAA GCGCGCTCAC GCAGGTGAGG ACGACACGAT GCTGATCGGC
TGGACCGGCG ACAACGGCGA TCCGGACAAT TGGCTCGGCA CGCTGCTCGG CTGCGAAGCG
GTGAACGGCA ACAACTTCTC GAAGTGGTGC TACAAGCCGT TCGACGACCT GATCCAGAAG
GGCCGCGTCA CGTCCGATCA GGGCGCGCGC ACGACGGCTT ACATGCAGGC GCAGCAGATC
TTCGCGCAGC AACTGCCGTT CTCGCCGATC GCTCACTCCA CGGTCTACCA GCCTGTCAGC
AAGAAGGTGG TGGATATGCG TATCGAACCG CTCGGCTATG CGCGTTTCGA CGGCGTCAGC
ATCAAGTAA
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| Protein sequence | MKQNNLLRAA RVTTLVAAAA ASMVGASVAR AEIPNKTLVY CSEGSPAGFD PAQYTTGTDF
TANTFTVYNR LVEFERGGTK VEPGLAEKWD VSADGKTYTF HLRHGVKFQT TSFFKPTREF
NADDVVFTFQ RMLDPNSAFH KAYPVQFPYF TDMGLDKLIT GVEKVDPYTV KFTLKEVNAP
FIQNLAMEYA SILSSEYGDQ LMKAGKAADI NQFPVGTGPF IFKSYTKDAT IRFDGNPDYW
KPNTVKISKL IFSITPDAGV RVQKIKRDEC QVMSYPRPAD IAPLKAEANI AMPSQPGFNL
GYLAYNVSHK PVDKVEVRQA LDMAINKKAI IDSVYQGAGQ AATNPMPPTQ WSYDKNLKGA
AYDTDKAKAL LAKAGYPNGF DITLWAMPVQ RAYNPNARLM AEMIQADWAK IGVKAKIVTY
EWGEYIKRAH AGEDDTMLIG WTGDNGDPDN WLGTLLGCEA VNGNNFSKWC YKPFDDLIQK
GRVTSDQGAR TTAYMQAQQI FAQQLPFSPI AHSTVYQPVS KKVVDMRIEP LGYARFDGVS
IK
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