Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3707 |
Symbol | |
ID | 6281650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 4151880 |
End bp | 4152533 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642623296 |
Product | histone family protein nucleoid-structuring protein H-NS |
Protein accession | YP_001897321 |
Protein GI | 187925679 |
COG category | [R] General function prediction only |
COG ID | [COG2916] DNA-binding protein H-NS |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.258134 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00183478 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGACCT TGGAATCCTT GCAAGCAAAA ATCCAGAGAC TACGGGCGCA AGCCGACGCG CTGCTCGCGA AAAAGTCGAG TGCCGTAATC GAGAAGATTA AGAACTTGAT GGCAGAACAC GGTCTTACGA CTGCTGACAT CGATGCGCAT ACAGGTGGCA AGAAACGTGG ACCAAAGCCG GGCGCTAAGG CCGCTGCCAA GTCGTCGGTT TCGGCCGCGA AGTACCGTGA CCCGAAGACG GGCGCGACAT GGTCGGGTCA TGGCCGCGCG CCGGGCTGGA TTGCCAGCGC TAAGGACCGC TCTACGTTTT TGGTTGAAGG CAACGCAGTG TCCTCCGCTC CTGCCGCAAA AAAGTCAGCG AAAGCCGGAA ATTATGTCAG GGGCCCGCAG CCAGCGCTCT ATCGTGACCC CAAGAGCGGC GCGACATGGA GTGGACGCGG GCGCGCGCCG GCGTGGATTG CTAGCGCCAA GGACCGCAGT CGATTTCTGA TTGACGGTGC TAACGCGGTC GACAAGAGGC CGGTGGTCAA GAAGCCTGCG GCCAAGAAGG CCCCGGCGGC AAAGAAAGCG TCGGGGACGA CAGCGTCGAG CAAGAAGATG ACTGCGCCCG CTCCGGGGGC GAAGGCCGGC TCTGAAGCTG CAGCGACTGT CTAA
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Protein sequence | MATLESLQAK IQRLRAQADA LLAKKSSAVI EKIKNLMAEH GLTTADIDAH TGGKKRGPKP GAKAAAKSSV SAAKYRDPKT GATWSGHGRA PGWIASAKDR STFLVEGNAV SSAPAAKKSA KAGNYVRGPQ PALYRDPKSG ATWSGRGRAP AWIASAKDRS RFLIDGANAV DKRPVVKKPA AKKAPAAKKA SGTTASSKKM TAPAPGAKAG SEAAATV
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