Gene Bphyt_3707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3707 
Symbol 
ID6281650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4151880 
End bp4152533 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content61% 
IMG OID642623296 
Producthistone family protein nucleoid-structuring protein H-NS 
Protein accessionYP_001897321 
Protein GI187925679 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.258134 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00183478 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGACCT TGGAATCCTT GCAAGCAAAA ATCCAGAGAC TACGGGCGCA AGCCGACGCG 
CTGCTCGCGA AAAAGTCGAG TGCCGTAATC GAGAAGATTA AGAACTTGAT GGCAGAACAC
GGTCTTACGA CTGCTGACAT CGATGCGCAT ACAGGTGGCA AGAAACGTGG ACCAAAGCCG
GGCGCTAAGG CCGCTGCCAA GTCGTCGGTT TCGGCCGCGA AGTACCGTGA CCCGAAGACG
GGCGCGACAT GGTCGGGTCA TGGCCGCGCG CCGGGCTGGA TTGCCAGCGC TAAGGACCGC
TCTACGTTTT TGGTTGAAGG CAACGCAGTG TCCTCCGCTC CTGCCGCAAA AAAGTCAGCG
AAAGCCGGAA ATTATGTCAG GGGCCCGCAG CCAGCGCTCT ATCGTGACCC CAAGAGCGGC
GCGACATGGA GTGGACGCGG GCGCGCGCCG GCGTGGATTG CTAGCGCCAA GGACCGCAGT
CGATTTCTGA TTGACGGTGC TAACGCGGTC GACAAGAGGC CGGTGGTCAA GAAGCCTGCG
GCCAAGAAGG CCCCGGCGGC AAAGAAAGCG TCGGGGACGA CAGCGTCGAG CAAGAAGATG
ACTGCGCCCG CTCCGGGGGC GAAGGCCGGC TCTGAAGCTG CAGCGACTGT CTAA
 
Protein sequence
MATLESLQAK IQRLRAQADA LLAKKSSAVI EKIKNLMAEH GLTTADIDAH TGGKKRGPKP 
GAKAAAKSSV SAAKYRDPKT GATWSGHGRA PGWIASAKDR STFLVEGNAV SSAPAAKKSA
KAGNYVRGPQ PALYRDPKSG ATWSGRGRAP AWIASAKDRS RFLIDGANAV DKRPVVKKPA
AKKAPAAKKA SGTTASSKKM TAPAPGAKAG SEAAATV