Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3682 |
Symbol | |
ID | 6281885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 4128559 |
End bp | 4129803 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642623271 |
Product | putative lipoprotein |
Protein accession | YP_001897296 |
Protein GI | 187925654 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000177686 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000000176343 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | ATGAATTGGA GAATCCTTTC GGTGCTCGCT CTTGCTGCAC CGTTGCTGGG GGCATGCGGT GGCGGCGGAG GAGGCGACGG GCCGGTGACG GAAGTCAGGC TGTGTCCGGC GTCGCTGGAC TACAGCACGG TGTTCACGGG CGGCGGCGGC GACGGCGAAC TGGTCAAGCT GCAACTCGAT ACGACCAAGA TGACCTGGCA GGTCAATTAC ATCGAATCGC CGATTCCGGC AACCACCGGC ACCGTCGTCC CGACACGCGC GGGCCAGTCC GCCAGCGGCA CGCTGACTCA GGAAACGCTC CTGCCGACCA ACAAGCTGAA CCAGTGCGCG TTCCGCCTGA ACGGCGCGAG TCTCGATCCG AATCGTCCCG CGCGGATTTT CGTCGGCGAA GGCGTGGCGG GCGGCACGAT CCCGGGCGCC GAGATTTCGT TCGGCGGGAT TCTCGGCGTG GGCGCCGTGC CGGATACCAA GTTCCCGTAT TACCCGTTCA TCGGCTTCTC GTCGATTGAA ACGAATCTCG CGAACGTGGC CGGCACGTAC AACCAGCTCG GCTATCACCA GGTGCCGTCA CAAAACTTCG CGCCGGTCGC GGTGGATTCG AAGATCACGA TCAACGCGGA CGGCACGTGG ACCGAGTGCG ACAACTCCGG CGTCAACGCG GGCAAGTGTC AGCAGCCGGG CGGCAACTTC GCGCCGGCGG CGGACGGCAG CGGCGCGTTC CAGACCAACA ACTTCCAGGG CCAGGCTAAA CCGACGCTCG CGGCGACGCC GGAAGCGCGC GGCTACATGA TCGTCGGCAA GCTGCGCAAC CAGCTCGTGC CGATCCTGGT GCGAACGGGC GCGGCGAACT CGTCGGTGAC GGTGCCGCAA AACGGCGCAC TCGGCCCGTA CGCCGACGAC GAATCAGGCA TCTCGATTCT GGCGCCGCAA AGCGCGATCA CGGTGAACTC GCAGAACGGG GAGTACATCG GCGTGGATAG CCAGTTCGAC TATCGCACCA CCGCGCTCGA AGGCACCGAG GCCACGCTGC TCGATCCGTT CAACGCCTCG CAGGCATCGC TCGCGACGGC GCTGAATCTC GACTTCACGC AAGCCGTGCC GGGCGTGGTG ACGACGACGA AAGTGGGCGC TTCCACCGGC ACTACGCCGA CCGGAAAGAT GATCTTTACG GGTGGTGTGT TCGGCTACCT CGATCTGACT AACGCGGCCT CGCCGTACTT CACGATCGGC GCCTTCGTCC AGTAA
|
Protein sequence | MNWRILSVLA LAAPLLGACG GGGGGDGPVT EVRLCPASLD YSTVFTGGGG DGELVKLQLD TTKMTWQVNY IESPIPATTG TVVPTRAGQS ASGTLTQETL LPTNKLNQCA FRLNGASLDP NRPARIFVGE GVAGGTIPGA EISFGGILGV GAVPDTKFPY YPFIGFSSIE TNLANVAGTY NQLGYHQVPS QNFAPVAVDS KITINADGTW TECDNSGVNA GKCQQPGGNF APAADGSGAF QTNNFQGQAK PTLAATPEAR GYMIVGKLRN QLVPILVRTG AANSSVTVPQ NGALGPYADD ESGISILAPQ SAITVNSQNG EYIGVDSQFD YRTTALEGTE ATLLDPFNAS QASLATALNL DFTQAVPGVV TTTKVGASTG TTPTGKMIFT GGVFGYLDLT NAASPYFTIG AFVQ
|
| |