| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3677 |
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| Symbol | |
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| ID | 6282896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4123030 |
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| End bp | 4123719 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642623266 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_001897291 |
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| Protein GI | 187925649 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0102182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000000000674126 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAGATC CAGTCAGGGT CGTGGTGGCT GACGACCATC CGGTTATTCT GTTCGGCGCC
GAGCAGGCTT TACTCAAGTT TCCCGGTTTG CAGGTCGTGG CGCGTGCGCG ACAGTCAACC
GAATTGATCA AAATACTGCA AACCGTTGCC TGCGACGTGC TCGTCACGGA TCTGGCAATG
CCAGGCGGTC AATATGGCGA CGGTTTGCCG CTGATCGGCT ACCTGCGCCG CAATTTTCCA
AAGCTTCCCA TCGTCGTCCT GACGATGCTT GAGAACGCGG CGTTGCTCAA GCGGCTAAGC
GAACTCGGCG TGACGTCCGT CGTGAACAAG TCGGACGATC TCAGTCATAT TGGGCTCGCG
GTGCAGCACG TCAGCCGCAA TCTCGAATAT ATGAGCCCGT CGGTGAAGGC GTCGCTAGAT
GCATTGCGCA TGAACGCCGG CGGTAAGAAC GACGAAGTCA TGCTGTCGAA ACGCGAGCTG
GAAGTGGTGC GCCTGTTCGT GTCGGGCATG ACGATCAAGG AGATATCGGA GCACCTGAAC
CGCAGCATCA AGACCATCAG CACACAGAAG AACACCGCCA TGCGCAAGCT CGGCATCGAA
CGGGATTCGG AGTTGTTCCA GTACGCGCAG AGCAATGGCT TGCTGAACCT GTCGTCGCAC
TCAACCGAAG ACGATAGCGG AGCGTCTTAA
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| Protein sequence | MQDPVRVVVA DDHPVILFGA EQALLKFPGL QVVARARQST ELIKILQTVA CDVLVTDLAM
PGGQYGDGLP LIGYLRRNFP KLPIVVLTML ENAALLKRLS ELGVTSVVNK SDDLSHIGLA
VQHVSRNLEY MSPSVKASLD ALRMNAGGKN DEVMLSKREL EVVRLFVSGM TIKEISEHLN
RSIKTISTQK NTAMRKLGIE RDSELFQYAQ SNGLLNLSSH STEDDSGAS
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